DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and LOC100333534

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_021322223.1 Gene:LOC100333534 / 100333534 -ID:- Length:1040 Species:Danio rerio


Alignment Length:308 Identity:75/308 - (24%)
Similarity:123/308 - (39%) Gaps:74/308 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 KVNSPAASSSPT----GADFPFRHPLKKCELTWPPPTEQLQLELPHPNPKLSPVLPHPQLQDYQT 284
            |.:|...:.|.|    |..|..:|.|          |:.:::   |...|     |:...|..::
Zfish   573 KTSSQTTAESNTCHQCGKSFAHKHYL----------TKHMRI---HTGEK-----PYTCQQCGKS 619

  Fly   285 RRKNKARTAATGGNATPNLPQRNKDR-YTCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSF 348
            .::.:        |...::...|.:: |||..|||.|....|||.|:|.||||:||.|:.|.:||
Zfish   620 FKRQE--------NLRQHMKIHNGEKLYTCHQCGKSFTWKQNLTFHMRIHTGEKPYTCQQCGKSF 676

  Fly   349 SISSNLQRHVRNIHNKERPFKCEICERCFGQQTNLDRHLKKHESDAVSLSALSGVSER----MHC 409
            :.|.||:.|:: |||.|:.:.|:.||:.|..:.||..|::.|            ..|:    .||
Zfish   677 NRSENLKEHMK-IHNGEKLYTCQKCEKSFTWKQNLTFHMRIH------------TGEKPFNCQHC 728

  Fly   410 IRRF-CENPTEESYFEEIRSFMGKV---TQQQQQQQQQQQH-DQQQQQHQSTATSASSSCSSSRD 469
            .:.| |    ::...:.:|...|:.   .|...:...::|| .:..:.|......|...|..|. 
Zfish   729 EKSFTC----KQHLTDHVRMHTGEKPFNCQHCGKSFARKQHLTRHMRMHNGEKPHACLQCGKSF- 788

  Fly   470 TPTSSHEEADHAPATSTADTAAPSSSRDQEEEDSQPIMELKRTLTSKL 517
              |..|....|              .|....|:....::..:..|.||
Zfish   789 --TWKHHLVTH--------------MRIHTGEEQHSCLQCGKAFTRKL 820

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 28/63 (44%)
zf-C2H2 311..333 CDD:278523 12/21 (57%)
C2H2 Zn finger 313..333 CDD:275368 10/19 (53%)
zf-H2C2_2 325..349 CDD:290200 14/23 (61%)
C2H2 Zn finger 341..362 CDD:275368 8/20 (40%)
zf-H2C2_2 353..377 CDD:290200 10/23 (43%)
zf-C2H2 368..390 CDD:278523 7/21 (33%)
C2H2 Zn finger 370..390 CDD:275368 7/19 (37%)
LOC100333534XP_021322223.1 Merozoite_SPAM 4..>87 CDD:284533
COG5048 72..489 CDD:227381
C2H2 Zn finger 89..109 CDD:275368
C2H2 Zn finger 117..137 CDD:275368
C2H2 Zn finger 145..165 CDD:275368
C2H2 Zn finger 173..193 CDD:275368
C2H2 Zn finger 201..221 CDD:275368
C2H2 Zn finger 232..252 CDD:275368
C2H2 Zn finger 260..280 CDD:275368
C2H2 Zn finger 288..308 CDD:275368
C2H2 Zn finger 316..336 CDD:275368
C2H2 Zn finger 344..364 CDD:275368
C2H2 Zn finger 372..392 CDD:275368
Merozoite_SPAM 500..>583 CDD:284533 2/9 (22%)
COG5048 562..960 CDD:227381 75/308 (24%)
C2H2 Zn finger 585..605 CDD:275368 5/32 (16%)
C2H2 Zn finger 613..633 CDD:275368 2/27 (7%)
C2H2 Zn finger 641..661 CDD:275368 10/19 (53%)
C2H2 Zn finger 669..689 CDD:275368 8/20 (40%)
C2H2 Zn finger 697..717 CDD:275368 7/19 (37%)
C2H2 Zn finger 725..745 CDD:275368 5/23 (22%)
C2H2 Zn finger 753..773 CDD:275368 3/19 (16%)
C2H2 Zn finger 781..801 CDD:275368 6/36 (17%)
C2H2 Zn finger 809..829 CDD:275368 3/12 (25%)
C2H2 Zn finger 837..857 CDD:275368
C2H2 Zn finger 868..888 CDD:275368
C2H2 Zn finger 896..916 CDD:275368
C2H2 Zn finger 924..942 CDD:275368
C2H2 Zn finger 952..972 CDD:275368
zf-H2C2_2 964..989 CDD:316026
C2H2 Zn finger 980..1000 CDD:275368
C2H2 Zn finger 1008..1028 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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