DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and LOC100332443

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_021322212.1 Gene:LOC100332443 / 100332443 -ID:- Length:722 Species:Danio rerio


Alignment Length:258 Identity:72/258 - (27%)
Similarity:103/258 - (39%) Gaps:71/258 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   278 QLQDYQTRRKNKARTAATGGNATPNLPQRNKDRYTCKFCGKVFPRSANLTRHLRTHTGEQPYKCK 342
            ||..|:..:|.                ..:|..:.|..|||.|.|:.:|.||...||||:|:||.
Zfish    76 QLDSYKQHQKT----------------HEDKRDHECLQCGKSFTRAGSLKRHHMIHTGEKPHKCS 124

  Fly   343 YCERSFSI----------------------------SSNLQRHVRNIHNKERPFKCEICERCFGQ 379
            |||:|||:                            ||:|:.|:| ||..|:|:.|..||:.|.:
Zfish   125 YCEKSFSVPEHLRVHERIHTGEKPYCCTQCGHDFSSSSSLKIHMR-IHTNEKPYACLFCEKRFSR 188

  Fly   380 QTNLDRHLKKH--ESDAVSL----SALSGVSERMHCIRRFCENPTEESYFEEIRSFMGKVTQQQQ 438
            ......|.|.|  |.|.|.|    |.:...|.::|.:....|.|.:.||.|  :||        :
Zfish   189 LDEQKMHQKTHTDERDHVCLDCGKSFIRAGSLKIHQMIHTGEKPHKCSYCE--KSF--------R 243

  Fly   439 QQQQQQQHDQQQQQHQSTATSASSSCSSSRDTP--TSSHE--EADHAPATSTA---DTAAPSS 494
            |.:..::|   ::.|........|.|..|...|  ...||  .....|.|.|.   |.::.||
Zfish   244 QSRDLKRH---ERIHTGEKPLKCSYCEKSFSLPGHLRRHERIHTGEKPFTCTQCGHDFSSSSS 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 29/90 (32%)
zf-C2H2 311..333 CDD:278523 9/21 (43%)
C2H2 Zn finger 313..333 CDD:275368 9/19 (47%)
zf-H2C2_2 325..349 CDD:290200 14/23 (61%)
C2H2 Zn finger 341..362 CDD:275368 12/48 (25%)
zf-H2C2_2 353..377 CDD:290200 10/23 (43%)
zf-C2H2 368..390 CDD:278523 6/21 (29%)
C2H2 Zn finger 370..390 CDD:275368 6/19 (32%)
LOC100332443XP_021322212.1 C2H2 Zn finger 39..59 CDD:275368
C2H2 Zn finger 67..87 CDD:275368 4/26 (15%)
C2H2 Zn finger 95..115 CDD:275368 9/19 (47%)
COG5048 119..591 CDD:227381 54/199 (27%)
C2H2 Zn finger 123..143 CDD:275368 7/19 (37%)
C2H2 Zn finger 151..171 CDD:275368 5/20 (25%)
C2H2 Zn finger 179..199 CDD:275368 6/19 (32%)
C2H2 Zn finger 207..227 CDD:275368 4/19 (21%)
C2H2 Zn finger 235..255 CDD:275368 7/32 (22%)
C2H2 Zn finger 263..283 CDD:275368 6/19 (32%)
C2H2 Zn finger 291..311 CDD:275368 4/13 (31%)
C2H2 Zn finger 319..339 CDD:275368
C2H2 Zn finger 347..367 CDD:275368
C2H2 Zn finger 375..395 CDD:275368
C2H2 Zn finger 403..421 CDD:275368
C2H2 Zn finger 519..539 CDD:275368
C2H2 Zn finger 547..567 CDD:275368
C2H2 Zn finger 575..595 CDD:275368
zf-H2C2_2 587..612 CDD:316026
C2H2 Zn finger 603..623 CDD:275368
zf-H2C2_2 615..640 CDD:316026
C2H2 Zn finger 631..651 CDD:275368
C2H2 Zn finger 659..679 CDD:275368
zf-H2C2_2 671..695 CDD:316026
C2H2 Zn finger 687..705 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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