DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and LOC100331219

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_021331297.1 Gene:LOC100331219 / 100331219 -ID:- Length:440 Species:Danio rerio


Alignment Length:250 Identity:66/250 - (26%)
Similarity:100/250 - (40%) Gaps:33/250 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   276 HPQLQDYQTRRKNKARTAATGGNATPNLPQRNKDR-YTCKFCGKVFPRSANLTRHLRTHTGEQPY 339
            |.:.:.|...:..|:.|...|  .|.::.....:| |||:.|.|.|....|...|:|.||||:||
Zfish   151 HTKERPYTCEQCGKSFTYKQG--FTTHMRIHTGERPYTCQQCKKSFYHPGNFAVHMRIHTGERPY 213

  Fly   340 KCKYCERSFSISSNLQRHVRNIHNKERPFKCEICERCFGQQTNLDRHLKKHESDAVSLSALSG-- 402
            .|:.|.:||..|.|...|:| ||..|||:.|..|.:.|.|...|:.|::.|..|...:....|  
Zfish   214 TCQQCGKSFYQSGNFAAHMR-IHTGERPYSCIQCGKSFKQNGTLEVHMRTHTGDRSFICTHCGKH 277

  Fly   403 --------VSERMH----------CIRRFCENPTEESYFEEIRSFMGKVTQQQQQQQQQQQHDQQ 449
                    :..|:|          |.:||.:   :.|....:|...|:...:..:..:...|...
Zfish   278 FSQKHDLNIHVRIHTGEKPHTCTQCGKRFIQ---KTSLGNHMRIHTGEKPYRCTECGKTFPHKST 339

  Fly   450 QQQHQSTATS----ASSSCSSSRDTPTSSHEEADHAPAT--STADTAAPSSSRDQ 498
            .:.|..|.|.    |.:.|.....|..|.....|:...|  .|.|....|.:|.:
Zfish   340 LKHHMRTHTGEKPFACAQCGKRFTTKASLKNLMDNHTGTIVLTCDQCEKSLTRKE 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 26/63 (41%)
zf-C2H2 311..333 CDD:278523 9/21 (43%)
C2H2 Zn finger 313..333 CDD:275368 7/19 (37%)
zf-H2C2_2 325..349 CDD:290200 12/23 (52%)
C2H2 Zn finger 341..362 CDD:275368 8/20 (40%)
zf-H2C2_2 353..377 CDD:290200 10/23 (43%)
zf-C2H2 368..390 CDD:278523 6/21 (29%)
C2H2 Zn finger 370..390 CDD:275368 6/19 (32%)
LOC100331219XP_021331297.1 COG5048 73..440 CDD:227381 66/249 (27%)
C2H2 Zn finger 103..123 CDD:275368
C2H2 Zn finger 131..151 CDD:275368 66/249 (27%)
C2H2 Zn finger 159..179 CDD:275368 4/21 (19%)
C2H2 Zn finger 187..207 CDD:275368 7/19 (37%)
C2H2 Zn finger 215..235 CDD:275368 8/20 (40%)
C2H2 Zn finger 243..263 CDD:275368 6/19 (32%)
C2H2 Zn finger 271..291 CDD:275368 2/19 (11%)
C2H2 Zn finger 299..319 CDD:275368 5/22 (23%)
C2H2 Zn finger 327..347 CDD:275368 2/19 (11%)
C2H2 Zn finger 412..432 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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