DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and zgc:173615

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_021331446.1 Gene:zgc:173615 / 100150682 ZFINID:ZDB-GENE-080218-20 Length:573 Species:Danio rerio


Alignment Length:179 Identity:57/179 - (31%)
Similarity:85/179 - (47%) Gaps:10/179 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   311 YTCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFKCEICER 375
            :||..|||.|..|::|.:|:|.||||:|:.|..|.:|||.||:|.:|:. ||..|:||.|..|.:
Zfish   206 FTCTQCGKSFSCSSSLNKHMRIHTGEKPFTCTQCGKSFSCSSSLNKHMM-IHTGEKPFTCTQCGK 269

  Fly   376 CFGQQTNLDRHLKKHESDAVSLSALSGVSERMHC---IRRFCENPTEESYFEEIRSFMGKVTQQQ 437
            .||:.:.|::|::.|..:........|.|  .:|   :.|...|.|.|..|...:  .||..:|.
Zfish   270 SFGRSSYLNQHMRIHTGEKPFTCTKCGKS--FNCSSHLNRHMRNHTGEKLFTCTQ--CGKSFRQP 330

  Fly   438 QQQQQQQQHDQQQQQHQSTATSASSSCSSSRDTPTSSHEEADHAPATST 486
            .......:....::....|....|.|.|||.:.....|..  ..|.|.|
Zfish   331 SLLYLHMRIHTGEKPFTCTQCGKSFSISSSLNQHMRIHTR--EKPFTCT 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 25/51 (49%)
zf-C2H2 311..333 CDD:278523 10/21 (48%)
C2H2 Zn finger 313..333 CDD:275368 9/19 (47%)
zf-H2C2_2 325..349 CDD:290200 11/23 (48%)
C2H2 Zn finger 341..362 CDD:275368 9/20 (45%)
zf-H2C2_2 353..377 CDD:290200 9/23 (39%)
zf-C2H2 368..390 CDD:278523 7/21 (33%)
C2H2 Zn finger 370..390 CDD:275368 6/19 (32%)
zgc:173615XP_021331446.1 C2H2 Zn finger 68..88 CDD:275368
zf-H2C2_2 80..105 CDD:316026
C2H2 Zn finger 96..116 CDD:275368
zf-H2C2_2 108..133 CDD:316026
C2H2 Zn finger 124..144 CDD:275368
COG5048 148..552 CDD:227381 57/179 (32%)
C2H2 Zn finger 152..172 CDD:275368
C2H2 Zn finger 180..200 CDD:275368
C2H2 Zn finger 208..228 CDD:275368 9/19 (47%)
C2H2 Zn finger 236..256 CDD:275368 9/20 (45%)
C2H2 Zn finger 264..284 CDD:275368 6/19 (32%)
C2H2 Zn finger 292..312 CDD:275368 4/21 (19%)
C2H2 Zn finger 320..340 CDD:275368 3/21 (14%)
C2H2 Zn finger 348..368 CDD:275368 6/19 (32%)
C2H2 Zn finger 376..396 CDD:275368 1/2 (50%)
C2H2 Zn finger 404..424 CDD:275368
C2H2 Zn finger 432..452 CDD:275368
C2H2 Zn finger 460..480 CDD:275368
C2H2 Zn finger 488..508 CDD:275368
C2H2 Zn finger 516..536 CDD:275368
C2H2 Zn finger 544..564 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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