DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and znf1077

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001108580.1 Gene:znf1077 / 100141492 ZFINID:ZDB-GENE-080218-11 Length:332 Species:Danio rerio


Alignment Length:123 Identity:40/123 - (32%)
Similarity:60/123 - (48%) Gaps:21/123 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   311 YTCKFCGKVFPRSANLTRHLRTHTGEQPYKCKYCERSFSISSNLQRHVRNIHNKERPFKCEICER 375
            |||:.||:.|..:.|..:|:|.||||:||.|..|.:|...|:||..|:| ||..|:|:.|..|.:
Zfish   107 YTCQQCGQRFYTTGNFAQHMRIHTGERPYTCLQCGKSLYQSANLAAHMR-IHTVEKPYSCIQCGK 170

  Fly   376 CFGQQTNLDRHLKKHESDAVSLSALSG----------VSERMH----------CIRRF 413
            .|.|.:.|:.|::.|....:......|          :..|:|          |.:||
Zfish   171 SFKQNSTLEAHIRAHNDGRIFTCPQCGKSFAQKQDLEIHTRIHTGEKPYTCTECGKRF 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 24/51 (47%)
zf-C2H2 311..333 CDD:278523 9/21 (43%)
C2H2 Zn finger 313..333 CDD:275368 7/19 (37%)
zf-H2C2_2 325..349 CDD:290200 12/23 (52%)
C2H2 Zn finger 341..362 CDD:275368 8/20 (40%)
zf-H2C2_2 353..377 CDD:290200 10/23 (43%)
zf-C2H2 368..390 CDD:278523 6/21 (29%)
C2H2 Zn finger 370..390 CDD:275368 6/19 (32%)
znf1077NP_001108580.1 C2H2 Zn finger 53..73 CDD:275368
zf-H2C2_2 65..90 CDD:290200
C2H2 Zn finger 81..101 CDD:275368
C2H2 Zn finger 109..129 CDD:275368 7/19 (37%)
C2H2 Zn finger 137..157 CDD:275368 8/20 (40%)
zf-H2C2_2 149..174 CDD:290200 11/25 (44%)
COG5048 <161..320 CDD:227381 14/68 (21%)
C2H2 Zn finger 165..185 CDD:275368 6/19 (32%)
CpXC 192..>241 CDD:291051 6/37 (16%)
C2H2 Zn finger 193..213 CDD:275368 2/19 (11%)
C2H2 Zn finger 221..241 CDD:275368 3/8 (38%)
zf-H2C2_2 234..258 CDD:290200
C2H2 Zn finger 249..269 CDD:275368
C2H2 Zn finger 277..297 CDD:275368
C2H2 Zn finger 304..324 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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