DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and klf12b

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001103335.1 Gene:klf12b / 100126139 ZFINID:ZDB-GENE-071004-22 Length:341 Species:Danio rerio


Alignment Length:251 Identity:71/251 - (28%)
Similarity:98/251 - (39%) Gaps:84/251 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 PPNAPPLTPPQCSIPAVHPTLLEAMTKNLPLQYRNVFAGVLPGKVNSPAASSSPTGADFPFRHPL 245
            ||::|...|.|     ||  .:..:.::|||.|..        .|.||:..||      ....||
Zfish   131 PPSSPSKLPSQ-----VH--RISVVVQSLPLMYTT--------SVRSPSTLSS------TIMLPL 174

  Fly   246 ---KKCELTWPPPTEQLQLELPHPNPKLSP----------VLPHPQLQDYQTRRKNKARTAATGG 297
               .:|:       ::.|.:   || .|||          .||:..|....          .||.
Zfish   175 LDEARCQ-------DKAQTD---PN-GLSPRQIKSDSDDDDLPNVTLDSVN----------ETGS 218

  Fly   298 NA-----------------------TPNLPQRNKDR-YTCKF--CGKVFPRSANLTRHLRTHTGE 336
            .|                       .|..|...|.| :.|.|  |.||:.:|::|..|.||||||
Zfish   219 TALSIARAVQDSMSPFSIESIRRPPPPESPDSKKRRIHRCDFAGCNKVYTKSSHLKAHRRTHTGE 283

  Fly   337 QPYKCKY--CERSFSISSNLQRHVRNIHNKERPFKCEICERCFGQQTNLDRHLKKH 390
            :||||.:  |...|:.|..|.||.|. |...:||||..|:|.|.:..:|..|.::|
Zfish   284 KPYKCTWDGCTWKFARSDELTRHYRK-HTGVKPFKCGDCDRSFSRSDHLALHRRRH 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 29/67 (43%)
zf-C2H2 311..333 CDD:278523 9/23 (39%)
C2H2 Zn finger 313..333 CDD:275368 9/21 (43%)
zf-H2C2_2 325..349 CDD:290200 13/25 (52%)
C2H2 Zn finger 341..362 CDD:275368 8/22 (36%)
zf-H2C2_2 353..377 CDD:290200 11/23 (48%)
zf-C2H2 368..390 CDD:278523 8/21 (38%)
C2H2 Zn finger 370..390 CDD:275368 6/19 (32%)
klf12bNP_001103335.1 zf-C2H2 256..280 CDD:278523 9/23 (39%)
C2H2 Zn finger 258..280 CDD:275368 9/21 (43%)
zf-H2C2_2 272..>289 CDD:290200 11/16 (69%)
C2H2 Zn finger 288..310 CDD:275368 8/22 (36%)
zf-H2C2_2 302..327 CDD:290200 12/25 (48%)
C2H2 Zn finger 318..338 CDD:275368 6/19 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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