DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10348 and zgc:162936

DIOPT Version :9

Sequence 1:NP_001286059.1 Gene:CG10348 / 35132 FlyBaseID:FBgn0032707 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001353568.1 Gene:zgc:162936 / 100005727 ZFINID:ZDB-GENE-030131-5253 Length:602 Species:Danio rerio


Alignment Length:219 Identity:53/219 - (24%)
Similarity:78/219 - (35%) Gaps:92/219 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 NPKLSPVLP------HPQLQDYQTRRKNKARTAATGGNATPNLPQRNKD---------------- 309
            ||:||.:..      |..::|..    |..||..|..:.|....:.|:|                
Zfish   388 NPELSEIQENDESENHDDIEDVD----NSIRTETTSSDKTLEKAESNRDLTCELCGRSFSQIYKL 448

  Fly   310 ---------------------------------------RYTCKFCGKVFPRSANLTRHLRTHTG 335
                                                   .||||.|||.|....||..|:|.|||
Zfish   449 KNHMIIHTGEKPFACERCGKSFFYKGNLISHIRVHTGEKPYTCKQCGKSFNYKGNLNSHIRIHTG 513

  Fly   336 EQPYKCKYCERSFSISSNLQRHVR---------------------------NIHNKERPFKCEIC 373
            |:|:.|..|.|.||...||..|:|                           .:|::::||.||:|
Zfish   514 EKPFTCTQCGRGFSFHGNLNYHMRVHTEEKAFSCKECGKSFNYKANLNSHMRVHSEKKPFTCEVC 578

  Fly   374 ERCFGQQTNLDRHLKKHESDAVSL 397
            |:.|.:::.|..|:|.|.|::|.:
Zfish   579 EKSFAKKSYLKAHIKLHSSESVQM 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10348NP_001286059.1 COG5048 300..>363 CDD:227381 29/144 (20%)
zf-C2H2 311..333 CDD:278523 12/21 (57%)
C2H2 Zn finger 313..333 CDD:275368 10/19 (53%)
zf-H2C2_2 325..349 CDD:290200 12/23 (52%)
C2H2 Zn finger 341..362 CDD:275368 9/47 (19%)
zf-H2C2_2 353..377 CDD:290200 11/50 (22%)
zf-C2H2 368..390 CDD:278523 9/21 (43%)
C2H2 Zn finger 370..390 CDD:275368 8/19 (42%)
zgc:162936NP_001353568.1 C2H2 Zn finger 95..115 CDD:275368
SFP1 <117..200 CDD:227516
C2H2 Zn finger 123..143 CDD:275368
C2H2 Zn finger 151..171 CDD:275368
C2H2 Zn finger 179..199 CDD:275368
zf-H2C2_2 191..216 CDD:316026
C2H2 Zn finger 207..227 CDD:275368
COG5048 231..597 CDD:227381 51/212 (24%)
C2H2 Zn finger 235..255 CDD:275368
C2H2 Zn finger 263..283 CDD:275368
C2H2 Zn finger 291..308 CDD:275368
C2H2 Zn finger 330..350 CDD:275368
C2H2 Zn finger 358..378 CDD:275368
C2H2 Zn finger 435..455 CDD:275368 0/19 (0%)
C2H2 Zn finger 463..483 CDD:275368 0/19 (0%)
C2H2 Zn finger 491..511 CDD:275368 10/19 (53%)
C2H2 Zn finger 519..539 CDD:275368 9/19 (47%)
C2H2 Zn finger 547..567 CDD:275368 0/19 (0%)
C2H2 Zn finger 575..595 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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