DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Irk3 and Kcnj11

DIOPT Version :9

Sequence 1:NP_001137835.2 Gene:Irk3 / 35131 FlyBaseID:FBgn0032706 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_112648.2 Gene:Kcnj11 / 83535 RGDID:69247 Length:390 Species:Rattus norvegicus


Alignment Length:370 Identity:123/370 - (33%)
Similarity:196/370 - (52%) Gaps:42/370 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 DHLETRSEQNPTFSFPYAHDWAGSTIELTPDLGSGPRTSSSDGLRRSLNRVMEKNGKENVVFRRI 132
            :::.||..::||                      .||..:.:  ||:  |.:.|.|..||..:.|
  Rat    11 EYVLTRLAEDPT----------------------EPRYRTRE--RRA--RFVSKKGNCNVAHKNI 49

  Fly   133 PEKSWRYMRDLVTTLMELEWKYMLTLFLGSYFLSWLLFAALCYVVAYSHGDFIFDPVSGKRMGEG 197
            .|:. |:::|:.|||::|:|.:.|.:|..|:..||||||.:.:::|::|||.        ..|||
  Rat    50 REQG-RFLQDVFTTLVDLKWPHTLLIFTMSFLCSWLLFAMVWWLIAFAHGDL--------APGEG 105

  Fly   198 VD-PCIYGVHSWVAMIIYSVETQTTLGFGEKYASEECPETIFLFVMQMLSAALIEGCMVSVIYAK 261
            .: ||:..:||:.:..::|:|.|.|:|||.:..:||||..|.:.::|.:...:|...|:..|:.|
  Rat   106 TNVPCVTSIHSFSSAFLFSIEVQVTIGFGGRMVTEECPLAILILIVQNIVGLMINAIMLGCIFMK 170

  Fly   262 TARPARQLTKLKFSDKAVICYRDGRLCLLFRVCDPREQQSIESKIRVYIIVDKRTREGETIKSH- 325
            ||:..|:...|.||..|||..|.||||.:.||.|.|:...|.:.|.:.::....:.|||.:..| 
  Rat   171 TAQAHRRAETLIFSKHAVITLRHGRLCFMLRVGDLRKSMIISATIHMQVVRKTTSPEGEVVPLHQ 235

  Fly   326 VELKLE---GNGEQIILWPDVVCHVIDETSPLSQFTTAKLFNAAQFELYVSIVGTSPATAQMTEA 387
            |::.:|   |.....::.|.::.||||..|||.....:.|.:....|:.|.:.|....|...|:|
  Rat   236 VDIPMENGVGGNSIFLVAPLIIYHVIDSNSPLYDLAPSDLHHHQDLEIIVILEGVVETTGITTQA 300

  Fly   388 KTSYLPREIFWGQRFVNIIHYDAQNERYIVDYENFNRTISVDMPM 432
            :||||..||.||||||.|:  ..::.||.|||..|..|:.|..|:
  Rat   301 RTSYLADEILWGQRFVPIV--AEEDGRYSVDYSKFGNTVKVPTPL 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk3NP_001137835.2 Ion_trans_2 119..432 CDD:304432 113/317 (36%)
Kcnj11NP_112648.2 IRK 36..356 CDD:279361 114/319 (36%)
Selectivity filter. /evidence=ECO:0000250 130..135 3/4 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346795
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D289862at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11767
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.950

Return to query results.
Submit another query.