DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk3 and kcnj10

DIOPT Version :9

Sequence 1:NP_001137835.2 Gene:Irk3 / 35131 FlyBaseID:FBgn0032706 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_001072312.1 Gene:kcnj10 / 779765 XenbaseID:XB-GENE-5777345 Length:378 Species:Xenopus tropicalis


Alignment Length:359 Identity:116/359 - (32%)
Similarity:195/359 - (54%) Gaps:24/359 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 TPDLGSGPRTSSSDGLRRSLNRVMEKNGKENVVFRRIPEKSWRYMRDLVTTLMELEWKYMLTLFL 160
            |....|.|...||  |||  .|||.|:|:.||....|.:|.:.|::||.||.::::|:|.|.||.
 Frog    12 TTQTDSRPLIGSS--LRR--RRVMTKDGRSNVRMDHIADKGFLYLKDLWTTFIDMQWRYKLLLFS 72

  Fly   161 GSYFLSWLLFAALCYVVAYSHGDFI-FDPVSGKRMGEGVDPCIYGVHSWVAMIIYSVETQTTLGF 224
            .::..:|.:|..:.|:||..|||.: |:..:..      .||:..||:.....::|:|:|||:|:
 Frog    73 ATFAGTWFVFGVIWYLVALVHGDLLEFNAPANH------TPCVMQVHTLTGAFLFSLESQTTIGY 131

  Fly   225 GEKYASEECPETIFLFVMQMLSAALIEGCMVSVIYAKTARPARQLTKLKFSDKAVICYRDGRLCL 289
            |.:|.|||||..|.|.:.|::...::|..:.....||.|||.::...:|||..||:...:|:|||
 Frog   132 GFRYISEECPYAIVLLITQLVLTTIMEIFITGTFLAKIARPKKRAETIKFSQNAVVSQHEGKLCL 196

  Fly   290 LFRVCDPREQQSIESKIRVYIIVDKRTREGETI---KSHVELKLEGNGEQ-IILWPDVVCHVIDE 350
            :.||.:.|:...|..::...::....|:|||.:   :.:|:.:::.:.:. .::.|....|::||
 Frog   197 MIRVANMRKSLLIGCQVTGKLLQTHLTKEGENVHLNQINVDFQVDTSSDSPFLILPLTFYHIVDE 261

  Fly   351 TSPLSQFTTAKLFNAAQFELYVSIVGTSPATAQMTEAKTSYLPREIFWGQRFVNIIHYDAQNERY 415
            :|||..  .|.......|||.|.:.||..:|:...:.:|||||.||.||..|..:|.. :.|.:|
 Frog   262 SSPLKD--VALRSGEGDFELVVILSGTVESTSATCQVRTSYLPEEILWGYEFSPVISV-SSNGKY 323

  Fly   416 IVDYENFNRTISVDMP------MTNPKNDHLKLE 443
            :.|:..|::.:.|..|      :....::.||||
 Frog   324 VADFSLFDQVLKVSPPCCIHETIRFGDSEKLKLE 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk3NP_001137835.2 Ion_trans_2 119..432 CDD:304432 102/323 (32%)
kcnj10NP_001072312.1 IRK 31..361 CDD:307239 106/336 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D289862at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11767
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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