DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk3 and Kcnj3

DIOPT Version :9

Sequence 1:NP_001137835.2 Gene:Irk3 / 35131 FlyBaseID:FBgn0032706 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_113798.1 Gene:Kcnj3 / 50599 RGDID:2958 Length:501 Species:Rattus norvegicus


Alignment Length:372 Identity:112/372 - (30%)
Similarity:195/372 - (52%) Gaps:42/372 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 GSGPRTSSSDGLRRSLNRVMEKNGKENVVFRRIPEKSWRYMRDLVTTLMELEWKYMLTLFLGSYF 164
            |.||:.......:|  .|.::|||:.||....:..::.||:.||.|||::|:|::.|.:|:.:|.
  Rat    30 GQGPQQQLVPKKKR--QRFVDKNGRCNVQHGNLGSETSRYLSDLFTTLVDLKWRWNLFIFILTYT 92

  Fly   165 LSWLLFAALCYVVAYSHGDFIFDPVSGKRMGEGVDPCIYGVHSWVAMIIYSVETQTTLGFGEKYA 229
            ::||..|::.:|:||:.||.      .|.......||:..|:::.:..::.:||:.|:|:|.:|.
  Rat    93 VAWLFMASMWWVIAYTRGDL------NKAHVGNYTPCVANVYNFPSAFLFFIETEATIGYGYRYI 151

  Fly   230 SEECPETIFLFVMQMLSAALIEGCMVSVIYAKTARPARQLTKLKFSDKAVICYRDGRLCLLFRVC 294
            :::|||.|.||:.|.:..::::..::..::.|.::|.::...|.||:.|||..|||:|.|:|||.
  Rat   152 TDKCPEGIILFLFQSILGSIVDAFLIGCMFIKMSQPKKRAETLMFSEHAVISMRDGKLTLMFRVG 216

  Fly   295 DPREQQSIESKIRVYIIVDKRTREGETIK-SHVELKL---EGNGEQIILWPDVVCHVIDETSP-- 353
            :.|....:.::||..::..::|.|||.:. ..:||.:   .|..:..::.|..:|||||..||  
  Rat   217 NLRNSHMVSAQIRCKLLKSRQTPEGEFLPLDQLELDVGFSTGADQLFLVSPLTICHVIDAKSPFY 281

  Fly   354 -LSQFTTAKLFNAAQFELYVSIVGTSPATAQMTEAKTSYLPREIFWGQRFVNIIHYDAQNERYIV 417
             |||    :.....|||:.|.:.|....|....:|:|||...|:.||.||..:|  ..:...:.|
  Rat   282 DLSQ----RSMQTEQFEVVVILEGIVETTGMTCQARTSYTEDEVLWGHRFFPVI--SLEEGFFKV 340

  Fly   418 DYENFNRTISVDMP---------------------MTNPKNDHLKLE 443
            ||..|:.|..|..|                     :||.|..|..:|
  Rat   341 DYSQFHATFEVPTPPYSVKEQEEMLLMSSPLIAPAITNSKERHNSVE 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk3NP_001137835.2 Ion_trans_2 119..432 CDD:304432 102/340 (30%)
Kcnj3NP_113798.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..40 3/9 (33%)
IRK 47..187 CDD:395797 43/145 (30%)
Selectivity filter. /evidence=ECO:0000250 143..148 2/4 (50%)
IRK_C 194..364 CDD:407551 58/175 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 456..501
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D289862at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11767
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

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