DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk3 and Kcnj5

DIOPT Version :9

Sequence 1:NP_001137835.2 Gene:Irk3 / 35131 FlyBaseID:FBgn0032706 Length:446 Species:Drosophila melanogaster
Sequence 2:XP_038936903.1 Gene:Kcnj5 / 29713 RGDID:61971 Length:438 Species:Rattus norvegicus


Alignment Length:354 Identity:115/354 - (32%)
Similarity:196/354 - (55%) Gaps:29/354 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 AHDW---AGSTIELTPDLGSGPRTSSSDGLRRSLNRVMEKNGKENVVFRRIPEKSWRYMRDLVTT 146
            |.|:   |.....|.|: |..||           .|.|||.||.||....:.| ::||:.||.||
  Rat    48 ARDYIPIATDRTRLLPE-GKKPR-----------QRYMEKTGKCNVHHGNVQE-TYRYLSDLFTT 99

  Fly   147 LMELEWKYMLTLFLGSYFLSWLLFAALCYVVAYSHGDFIFDPVSGKRMGEGVDPCIYGVHSWVAM 211
            |::|:|::.|.:|...|.::||.|..:.:::||..||  .|.|..:   |.: ||:..:..:|:.
  Rat   100 LVDLKWRFNLLVFTMVYTITWLFFGFIWWLIAYVRGD--LDHVGDQ---EWI-PCVENLSGFVSA 158

  Fly   212 IIYSVETQTTLGFGEKYASEECPETIFLFVMQMLSAALIEGCMVSVIYAKTARPARQLTKLKFSD 276
            .::|:||:||:|:|.:..:|:|||.|.|.::|.:..:::...||..::.|.::|.::...|.||:
  Rat   159 FLFSIETETTIGYGFRVITEKCPEGIILLLVQAILGSIVNAFMVGCMFVKISQPKKRAETLMFSN 223

  Fly   277 KAVICYRDGRLCLLFRVCDPREQQSIESKIRVYIIVDKRTREGETI---KSHVELKLE-GNGEQI 337
            .|||..||.:|||:|||.|.|....:|:.||..:|..::|:|||.|   ::.:.:..: |:....
  Rat   224 NAVISMRDEKLCLMFRVGDLRNSHIVEASIRAKLIKSRQTKEGEFIPLNQTDINVGFDTGDDRLF 288

  Fly   338 ILWPDVVCHVIDETSPLSQFTTAKLFNAAQFELYVSIVGTSPATAQMTEAKTSYLPREIFWGQRF 402
            ::.|.::.|.|:|.||..:.:.|:| ...:||:.|.:.|...||....:|::||:..|:.||.||
  Rat   289 LVSPLIISHEINEKSPFWEMSRAQL-EQEEFEVVVILEGMVEATGMTCQARSSYMDTEVLWGHRF 352

  Fly   403 VNIIHYDAQNERYIVDYENFNRTISVDMP 431
            ..::  ..:...|.|||..|:.|...:.|
  Rat   353 TPVL--TLEKGFYEVDYNTFHDTYETNTP 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk3NP_001137835.2 Ion_trans_2 119..432 CDD:304432 106/317 (33%)
Kcnj5XP_038936903.1 IRK 73..212 CDD:395797 50/145 (34%)
IRK_C 219..390 CDD:407551 55/164 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D289862at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11767
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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