DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk3 and irk-1

DIOPT Version :9

Sequence 1:NP_001137835.2 Gene:Irk3 / 35131 FlyBaseID:FBgn0032706 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_509138.2 Gene:irk-1 / 180944 WormBaseID:WBGene00002149 Length:544 Species:Caenorhabditis elegans


Alignment Length:351 Identity:126/351 - (35%)
Similarity:197/351 - (56%) Gaps:17/351 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 TIELTPDLGSGP-RTSSSDGLRRSLNRVMEKNGKENVVFRRIPEKSWRYMRDLVTTLMELEWKYM 155
            |:..|....|.| ...|:..|::|  |::.|||..||....:|:|..:|:||:.||:::::|::|
 Worm    50 TLAFTARRNSSPLYRKSTKKLKKS--RLVGKNGICNVYNTNVPKKDRQYLRDIFTTMIDVKWRWM 112

  Fly   156 LTLFLGSYFLSWLLFAALCYVVAYSHGDF-IFDPVSGKRMGEGVDPCIYGVHSWVAMIIYSVETQ 219
            |.||..::.|||.:|....|::|..|||. :..||:.       ..|:..:.|..:..:::|||.
 Worm   113 LMLFASAFVLSWSIFGTTYYLIALVHGDLSLPTPVNH-------TACVMNLDSVYSSFLFAVETH 170

  Fly   220 TTLGFGEKYASEECPETIFLFVMQMLSAALIEGCMVSVIYAKTARPARQLTKLKFSDKAVICYRD 284
            .|:|:|.:|.:.||.....:..:|.:.|.|::..||.:::||.|||.::...:.||||||||.||
 Worm   171 HTIGYGHRYITTECYLAGAIVCLQAICALLLQSFMVGIVFAKMARPKKRAETIIFSDKAVICLRD 235

  Fly   285 GRLCLLFRVCDPREQQSIESKIRVYIIVDKRTREGETIKSH-VELK----LEGNGEQIILWPDVV 344
            |:||.|.||.|.|....:|:.:|:..|.|:.|.|||....| .|:|    :..:....::||..:
 Worm   236 GQLCFLCRVGDMRNTHLVEAHVRLQFITDRETNEGEIEPLHQFEMKVGPSIADDDRLFLVWPTTL 300

  Fly   345 CHVIDETSPLSQFTTAKLFNAAQFELYVSIVGTSPATAQMTEAKTSYLPREIFWGQRFVNIIHYD 409
            |||||..|||..:....|. :||||:.|.:.|...:|....:|||||||.|:.||.||..::.|.
 Worm   301 CHVIDSRSPLYNYNQQTLM-SAQFEIIVLLEGIVESTGMTAQAKTSYLPSEVLWGHRFRKLVTYQ 364

  Fly   410 AQNERYIVDYENFNRTISVDMPMTNP 435
            ..|..|.:||:.|:.|..|..|..:|
 Worm   365 RSNGSYQIDYDLFHSTYPVRTPAMSP 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk3NP_001137835.2 Ion_trans_2 119..432 CDD:304432 116/318 (36%)
irk-1NP_509138.2 IRK 76..405 CDD:279361 118/323 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162797
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D289862at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11767
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.950

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