DRSC/TRiP Functional Genomics Resources

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Protein Alignment Irk3 and kcnj1

DIOPT Version :9

Sequence 1:NP_001137835.2 Gene:Irk3 / 35131 FlyBaseID:FBgn0032706 Length:446 Species:Drosophila melanogaster
Sequence 2:XP_004916228.1 Gene:kcnj1 / 100487609 XenbaseID:XB-GENE-483960 Length:372 Species:Xenopus tropicalis


Alignment Length:326 Identity:107/326 - (32%)
Similarity:183/326 - (56%) Gaps:14/326 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 RRSLNRVMEKNGKENVVFRRIPEKS-WRYMRDLVTTLMELEWKYMLTLFLGSYFLSWLLFAALCY 175
            :|..:|::.|:|:.|:.|..:.|:| ..::.|:.||:::|:|:|.:|:|:.::..||.||..|.|
 Frog    17 QRRRSRLVSKDGRCNIEFGNVEEQSRVAFLADIWTTILDLKWRYKMTVFISAFLGSWFLFGLLWY 81

  Fly   176 VVAYSHGDF-IFDPVSGKRMGEGVDPCIYGVHSWVAMIIYSVETQTTLGFGEKYASEECPETIFL 239
            .|||.|.|. .|:|      .....||:..::...:..::|:|||.|:|:|.:..:|:|...|||
 Frog    82 AVAYLHKDLPEFNP------SVNHTPCVENINGLTSSFLFSLETQVTIGYGFRCVTEQCATAIFL 140

  Fly   240 FVMQMLSAALIEGCMVSVIYAKTARPARQLTKLKFSDKAVICYRDGRLCLLFRVCDPREQQSIES 304
            .|:|.:...:|...|...|.||.:||.::...:.||..|||..|.|:||||.||.:.|:...|.|
 Frog   141 LVVQSILGVIINSFMCGAILAKISRPKKRAKTITFSKNAVISKRGGKLCLLIRVANLRKSLLIGS 205

  Fly   305 KIRVYIIVDKRTREGETI---KSHVELKLEGNGEQI-ILWPDVVCHVIDETSPLSQFTTAKLFNA 365
            .|...::....|.|||||   :.::|..::...|.: .:.|..:.|:||:.||..:.:...|.. 
 Frog   206 HIYGKLLKTTVTPEGETIILDQVNIEFTVDAGSENLFFVSPLTIYHIIDKDSPFFEMSAETLLQ- 269

  Fly   366 AQFELYVSIVGTSPATAQMTEAKTSYLPREIFWGQRFVNIIHYDAQNERYIVDYENFNRTISVDM 430
            ..|||.|.:.||..:|:...:.:||::|.|:.||.||..::. ..:..:|.||:.||::|:.|:.
 Frog   270 HDFELVVFLDGTVESTSATCQVRTSFIPDEVLWGYRFAPLVS-KTKEGKYRVDFSNFSKTLEVET 333

  Fly   431 P 431
            |
 Frog   334 P 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk3NP_001137835.2 Ion_trans_2 119..432 CDD:304432 105/319 (33%)
kcnj1XP_004916228.1 IRK 24..166 CDD:366415 48/147 (33%)
IRK_C 173..345 CDD:375232 55/164 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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