DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Irk3 and kcnj16

DIOPT Version :9

Sequence 1:NP_001137835.2 Gene:Irk3 / 35131 FlyBaseID:FBgn0032706 Length:446 Species:Drosophila melanogaster
Sequence 2:XP_012821552.1 Gene:kcnj16 / 100145730 XenbaseID:XB-GENE-987679 Length:413 Species:Xenopus tropicalis


Alignment Length:321 Identity:108/321 - (33%)
Similarity:175/321 - (54%) Gaps:13/321 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 NRVMEKNGKENVVFRRIPEKSWRYMRDLVTTLMELEWKYMLTLFLGSYFLSWLLFAALCYVVAYS 180
            ||.|:|:|..||.|:.|..:...|:.|:.|||::::|::||.:|..||.||||||..:.:::|..
 Frog    32 NRFMQKDGSCNVYFKNIFGEWESYVVDIFTTLVDIKWRHMLIIFSLSYVLSWLLFGFIFWIIALQ 96

  Fly   181 HGDFIFDPVSGKRMGEGVDPCIYGVHSWVAMIIYSVETQTTLGFGEKYASEECPETIFLFVMQML 245
            |||.         ....:.|||..|.::....::|:|||||:|:|.:..:|||...|.|..:|.:
 Frog    97 HGDL---------SDMEITPCIDNVRTFAGAFLFSLETQTTIGYGNRCVTEECYMAIILVTLQSV 152

  Fly   246 SAALIEGCMVSVIYAKTARPARQLTKLKFSDKAVICYRDGRLCLLFRVCDPREQQSIESKIRVYI 310
            .:.:|:..::....||.|...::...::||..|::..|||:|||::|:.|.|....:|..:|..:
 Frog   153 LSCIIDTFIIGAAMAKMATARKRAQTIRFSYFALVGIRDGKLCLMWRIGDFRPNHVVEGNVRAQL 217

  Fly   311 IVDKRTREGETIKSHVELKLEGNGEQIILWPDVVCHVIDETSPLSQFTTAKLFNAAQFELYVSIV 375
            :......|......:.:|||. |.:.|::.|..|.||||:.|||... ..|...:.:||:.|:.:
 Frog   218 LRYHEDHEKGITMEYKDLKLV-NDQIILVTPVTVVHVIDQDSPLYAL-DRKGLASDRFEILVTFI 280

  Fly   376 GTSPATAQMTEAKTSYLPREIFWGQRFVNIIHYDAQNERYIVDYENFNRTISVDMPMTNPK 436
            .|..:|....:::||||||||.||.||.||:  .|:.:.|.||...|........|..:.|
 Frog   281 YTGDSTGTSHQSRTSYLPREILWGFRFNNIL--QAKKKYYKVDCVQFEEMTEYYAPFCSAK 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Irk3NP_001137835.2 Ion_trans_2 119..432 CDD:304432 104/312 (33%)
kcnj16XP_012821552.1 IRK 35..170 CDD:395797 49/143 (34%)
IRK_C 179..342 CDD:407551 56/165 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D289862at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11767
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

Return to query results.
Submit another query.