DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Faf2 and UBX2

DIOPT Version :9

Sequence 1:NP_001286057.1 Gene:Faf2 / 35129 FlyBaseID:FBgn0025608 Length:464 Species:Drosophila melanogaster
Sequence 2:NP_013699.1 Gene:UBX2 / 854995 SGDID:S000004475 Length:584 Species:Saccharomyces cerevisiae


Alignment Length:552 Identity:120/552 - (21%)
Similarity:219/552 - (39%) Gaps:131/552 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LTNEQTEKVLQFQDLTGI--EDMNVCRDVLIRHQWDLEVAFQEQLN-------IREGRPTMFAA- 60
            |::.:.:|:.:||.:|..  ||:.....:|..|.|.||.|.....:       .:.|.||..:. 
Yeast    13 LSHTEEDKLNEFQVITNFPPEDLPDVVRLLRNHGWQLEPALSRYFDGEWKGEPDQMGEPTQTSTP 77

  Fly    61 STDVRAPAVLNDRFLQQVFSANMPGGRTVSRVPSGPVPRSFTG---------------------- 103
            ..:...|..|..|.|  :|:|::|..|        |:|.:|..                      
Yeast    78 MAETLVPPALGPRPL--LFTASLPVVR--------PLPANFRNDFRTIGLNGRSNTVWSMFESFS 132

  Fly   104 -----------IIGYVIN----FVFQYFYSTLTSIVSAFVNLGGGNE------------ARLVTD 141
                       :|..:||    .:|. |:.||.|:.|.   .||||.            .|....
Yeast   133 YDGNPFLFILLLIPRIINRLSATIFT-FFCTLLSLHSI---SGGGNSGKPKISKVPKAPTRETHI 193

  Fly   142 PLGDVMKFIREYYERYPEHPVFYQG-TYAQALNDAKQELRFLIVYLHKD----PAKNPDVES--F 199
            ||.:::...:: .:.:.|...|... ::.:||..||:|.:|:::.|..|    .....||.|  .
Yeast   194 PLAEILGDTKD-KDAFCELKSFKPDISFNEALRIAKEEFKFMLLILVGDTYDTDTDTVDVNSKLL 257

  Fly   200 CRNTLSARSVIDY---INTHTLLWGCDVATPEGYRVMQSITVRSYPTMVMISLRAN--------- 252
            ....|..:..:.|   |:...:::...|...|.:.|.:.:.||:.|.:.:|:..||         
Yeast   258 LEKILLNKKTLQYLRKIDNDLIIYLKCVHELEPWLVARQLGVRNTPEIFLIANVANKASHSETLP 322

  Fly   253 --RMMIVGRFEGDCTPEELLRRLQSVTNANEVWLSQARADRLERN---FTQTLRRQQDEAYEQSL 312
              |:.|:|:.:    ...|.|.|||:||..|.:..:...::.|.:   .::.:::.|::||::||
Yeast   323 SQRLSILGKLK----VNSLNRFLQSLTNVVEKYTPELVVNKTEMHELRMSREIKKLQEDAYKKSL 383

  Fly   313 LADEEKERQRQRERDAVRQAEEAVEQARRDVELRKEEIARQKIELATLVPSEPAADAVGAIAVV- 376
            ..|..|..::          |::::.|:   :|:....|||...|...:......:..|..|.: 
Yeast   384 EMDRIKAIEK----------EKSLKHAQ---DLKLNSTARQLKWLKACIDEIQPFETTGKQATLQ 435

  Fly   377 FKLPSGTRLERRFNQTDSVLDVYHYLFCH----PDSPDEFEITTNFPKRVLFSKANLD----AAG 433
            |:..||.|..::|....::..:|..:.||    ..|.|..|.:.....::....|:.|    ..|
Yeast   436 FRTSSGKRFVKKFPSMTTLYQIYQSIGCHIYLAVYSSDPAEWSNALQDKIRQLSADDDMLCFKEG 500

  Fly   434 ETGTAKETLTKTLQAVG--LKNREVLFVNDLE 463
            :..||..|   |::.:|  :.|....|  |||
Yeast   501 QLETATAT---TIEELGHIINNELTSF--DLE 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Faf2NP_001286057.1 UBA_FAF2 12..49 CDD:270597 12/38 (32%)
UAS_ETEA 163..280 CDD:239289 34/137 (25%)
ATP-synt_B <287..>373 CDD:304375 16/88 (18%)
UBQ 373..462 CDD:294102 22/99 (22%)
UBX2NP_013699.1 UBA_4 19..61 CDD:405274 12/41 (29%)
Ubiquitin_like_fold 431..570 CDD:421700 25/102 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1363
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23322
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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