DRSC/TRiP Functional Genomics Resources

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Protein Alignment Faf2 and UBX3

DIOPT Version :9

Sequence 1:NP_001286057.1 Gene:Faf2 / 35129 FlyBaseID:FBgn0025608 Length:464 Species:Drosophila melanogaster
Sequence 2:NP_010192.1 Gene:UBX3 / 851467 SGDID:S000002249 Length:455 Species:Saccharomyces cerevisiae


Alignment Length:443 Identity:105/443 - (23%)
Similarity:183/443 - (41%) Gaps:125/443 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 PAVLNDRFLQQVFSANMPGGRTVSRVPSGPVPRSFTGIIGYVINFVFQ----YFYSTLTSIVSA- 126
            ||.||.|...|..:.|.|   |.||          .|.:..:::|:||    ..|..|..||.: 
Yeast    27 PADLNGRTEDQNSNTNEP---TQSR----------DGRLKSILHFLFQAPLIVLYYLLNFIVRSS 78

  Fly   127 -----FVNLGG-----------------------GNEARLVTDPLGD------------------ 145
                 .:.|.|                       .|||:.||...|:                  
Yeast    79 RLLKPLLRLHGFYQRKHNRLLDHSSQLHRLLENLENEAQAVTCSEGNGNNDDGSNTDSTSNNESS 143

  Fly   146 -VMKFIREYYERYPEHPVF----YQGTYAQALNDAKQELRFLIVYLHKDPAKNPDVESFCRNTLS 205
             |.......|.  ||:..|    .|.:|.:.|:...::::|.::||| ||..:..:: :....|.
Yeast   144 GVQFSFGSLYN--PENGTFSKSIMQNSYTELLDACSEQVKFGVIYLH-DPLLDNHMD-YVNKILC 204

  Fly   206 ARSVIDYINTH-TLLWGCDVATPEGYRVMQSITVRSYPTMVMISLRANRMM-IVGRFEGDCTPEE 268
            :.:.::.|..: .|||..||.|.||.:|..::.:|.||.:.:|||:|.:.: ::.|.||..:..:
Yeast   205 SEAFVNMIRKYQVLLWYGDVTTSEGLQVSNALKIRQYPLLGIISLKAEKKIELIARVEGSISNYK 269

  Fly   269 LLRRLQSVTNANEVWLSQARADRLERNFTQTLRRQQDEAYEQSLLADEEKERQRQRERDAVRQAE 333
             .:.|:::.:.|...|.|.|..|......:.:|:|||..|:.||..|:::|.:|           
Yeast   270 -AQDLEAIFSKNYSRLIQLRQQRQNIEMQRLIRQQQDSRYQDSLRRDQQRESER----------- 322

  Fly   334 EAVEQARRDVELRKEEIARQKIELATL------VPSEPAADAVGAIAVVFKLPSGTRLERRFNQT 392
              :||.:|: ::.:|   .|:||...|      :..||::|. .|..|..:|.:|.||.|:|:.:
Yeast   323 --LEQTQRE-QMERE---HQRIENQWLLWRKSQLKPEPSSDK-DASKVAIRLENGQRLVRKFDAS 380

  Fly   393 DSVLDVYHYL----------------------FCHPDSPDEFEITTNFPKRVL 423
            ....::|.::                      :.|..|   |::.|..|:|.|
Yeast   381 LPTEEIYAFVELQLHDMLNSENDTLPVYQPANYQHQYS---FKLITPVPRREL 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Faf2NP_001286057.1 UBA_FAF2 12..49 CDD:270597
UAS_ETEA 163..280 CDD:239289 32/122 (26%)
ATP-synt_B <287..>373 CDD:304375 23/91 (25%)
UBQ 373..462 CDD:294102 15/73 (21%)
UBX3NP_010192.1 UAS 151..274 CDD:214737 34/127 (27%)
DUF5401 <271..>360 CDD:375164 27/106 (25%)
UBX 357..452 CDD:395637 17/78 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 82 1.000 Domainoid score I1978
eggNOG 1 0.900 - - E1_KOG1363
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 89 1.000 Inparanoid score I1559
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005640
OrthoInspector 1 1.000 - - oto99654
orthoMCL 1 0.900 - - OOG6_102329
Panther 1 1.100 - - O PTHR23322
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2328
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.890

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