DRSC/TRiP Functional Genomics Resources

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Protein Alignment Faf2 and UBXN8

DIOPT Version :9

Sequence 1:NP_001286057.1 Gene:Faf2 / 35129 FlyBaseID:FBgn0025608 Length:464 Species:Drosophila melanogaster
Sequence 2:XP_011542957.1 Gene:UBXN8 / 7993 HGNCID:30307 Length:327 Species:Homo sapiens


Alignment Length:239 Identity:50/239 - (20%)
Similarity:96/239 - (40%) Gaps:62/239 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   269 LLRRLQSVTNANEVWLSQARADRL------ERN--FTQTLRRQQDEA-------YEQSLLADEEK 318
            ||....|||.:   ||:..::.::      |:|  ..:.:|::|.||       |.:::|...::
Human   104 LLTLTISVTTS---WLNSFKSPQVYLKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQE 165

  Fly   319 ERQRQRERDAVRQAEEAVE------------QARRDVELRKEEIARQK------------IELAT 359
            .:.|:.|....:...||.:            .::...|....|.|:.:            .|..|
Human   166 MKLRKLEERFYQMTGEAWKLSSGHKLGGDEGTSQTSFETSNREAAKSQNLPKPLTEFPSPAEQPT 230

  Fly   360 L-----VPSEPAADAVGAIAVVFKLPSGTRLERRFNQTDSVLDVYHYLFCHPDSPDEFEITTNFP 419
            .     :|.||:..|...:.|..:.|||..|.|||.::.|...::.::.........:.::|:||
Human   231 CKEIPDLPEEPSQTAEEVVTVALRCPSGNVLRRRFLKSYSSQVLFDWMTRIGYHISLYSLSTSFP 295

  Fly   420 KRVLFSKANLDAAGETGTAKETLTKTLQAVGLKNREVLFVNDLE 463
            :|.|        |.|.|       ::|:.:|:....||.:.:.|
Human   296 RRPL--------AVEGG-------QSLEDIGITVDTVLILEEKE 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Faf2NP_001286057.1 UBA_FAF2 12..49 CDD:270597
UAS_ETEA 163..280 CDD:239289 5/10 (50%)
ATP-synt_B <287..>373 CDD:304375 21/129 (16%)
UBQ 373..462 CDD:294102 21/88 (24%)
UBXN8XP_011542957.1 UBX 243..322 CDD:279169 22/93 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141665
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1363
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23322
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.930

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