DRSC/TRiP Functional Genomics Resources

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Protein Alignment Faf2 and UBXN8

DIOPT Version :10

Sequence 1:NP_477388.1 Gene:Faf2 / 35129 FlyBaseID:FBgn0025608 Length:464 Species:Drosophila melanogaster
Sequence 2:XP_011542957.1 Gene:UBXN8 / 7993 HGNCID:30307 Length:327 Species:Homo sapiens


Alignment Length:239 Identity:50/239 - (20%)
Similarity:96/239 - (40%) Gaps:62/239 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   269 LLRRLQSVTNANEVWLSQARADRL------ERN--FTQTLRRQQDEA-------YEQSLLADEEK 318
            ||....|||.:   ||:..::.::      |:|  ..:.:|::|.||       |.:::|...::
Human   104 LLTLTISVTTS---WLNSFKSPQVYLKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQE 165

  Fly   319 ERQRQRERDAVRQAEEAVE------------QARRDVELRKEEIARQK------------IELAT 359
            .:.|:.|....:...||.:            .::...|....|.|:.:            .|..|
Human   166 MKLRKLEERFYQMTGEAWKLSSGHKLGGDEGTSQTSFETSNREAAKSQNLPKPLTEFPSPAEQPT 230

  Fly   360 L-----VPSEPAADAVGAIAVVFKLPSGTRLERRFNQTDSVLDVYHYLFCHPDSPDEFEITTNFP 419
            .     :|.||:..|...:.|..:.|||..|.|||.::.|...::.::.........:.::|:||
Human   231 CKEIPDLPEEPSQTAEEVVTVALRCPSGNVLRRRFLKSYSSQVLFDWMTRIGYHISLYSLSTSFP 295

  Fly   420 KRVLFSKANLDAAGETGTAKETLTKTLQAVGLKNREVLFVNDLE 463
            :|.|        |.|.|       ::|:.:|:....||.:.:.|
Human   296 RRPL--------AVEGG-------QSLEDIGITVDTVLILEEKE 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Faf2NP_477388.1 UBA_FAF2 12..49 CDD:270597
UAS_ETEA 163..280 CDD:239289 5/10 (50%)
PDCD7 267..>370 CDD:464979 27/144 (19%)
UBX_UBXN3B 373..461 CDD:340537 21/87 (24%)
UBXN8XP_011542957.1 Ubl1_cv_Nsp3_N-like 247..322 CDD:475130 21/89 (24%)
Blue background indicates that the domain is not in the aligned region.

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