DRSC/TRiP Functional Genomics Resources

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Protein Alignment Faf2 and Faf2

DIOPT Version :9

Sequence 1:NP_001286057.1 Gene:Faf2 / 35129 FlyBaseID:FBgn0025608 Length:464 Species:Drosophila melanogaster
Sequence 2:NP_848484.2 Gene:Faf2 / 76577 MGIID:1923827 Length:445 Species:Mus musculus


Alignment Length:462 Identity:197/462 - (42%)
Similarity:276/462 - (59%) Gaps:25/462 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EADGLTNEQTEKVLQFQDLTGIEDMNVCRDVLIRHQWDLEVAFQEQLNIREGRPTMFAASTDVRA 66
            |...||.|||||:||||||||||.|..||..|.:|.|::|.|.|::||.:||.|::|..     .
Mouse     5 EEQDLTQEQTEKLLQFQDLTGIESMEQCRLALEQHNWNMEAAVQDRLNEQEGVPSVFNP-----P 64

  Fly    67 PAVLNDRFLQQVFSANMPGGRTVSRVPSGPVPRSFTGIIGYVINFVFQYFYSTLTSIVSAFVNLG 131
            ||    |.||    .|....|..|.|.|.|.||...|...|:|...|::.|.|:..|....:...
Mouse    65 PA----RPLQ----VNTADHRIYSYVVSRPQPRGLLGWGYYLIMLPFRFTYYTILDIFRFALRFI 121

  Fly   132 GGNEARLVTDPLGDVMKFIREYYERYPE-HPVFYQGTYAQALNDAKQELRFLIVYLHKDPAKNPD 195
            ..:....||||:||::.|:..:.|:|.. |||||||||:|||||||:|||||:||||.|  .:.|
Mouse   122 RPDPRSRVTDPVGDIVSFMHSFEEKYGRAHPVFYQGTYSQALNDAKRELRFLLVYLHGD--DHQD 184

  Fly   196 VESFCRNTLSARSVIDYINTHTLLWGCDVATPEGYRVMQSITVRSYPTMVMISLRANRMMIVGRF 260
            .:.||||.|.|..||..||:..|.|.|....||||||.|::...:||.:.||.|:..||.:|||.
Mouse   185 SDEFCRNALCAPEVISLINSRMLFWACSTNKPEGYRVSQALRENTYPFLAMIMLKDRRMTVVGRL 249

  Fly   261 EGDCTPEELLRRLQSVTNANEVWLSQARADRLERNFTQTLRRQQDEAYEQSLLADEEKERQRQRE 325
            ||...|::|:.:|..:.:||:.:|...|.:|.|||.||.||:||||||..||.||:||||:::.|
Mouse   250 EGLIQPDDLINQLTFIMDANQTYLVSERLEREERNQTQVLRQQQDEAYLASLRADQEKERKKREE 314

  Fly   326 RDAVRQAEEAVEQARRDVELRKEEIARQKIELATLVPSEPAADAVGAIAVVFKLPSGTRLERRFN 390
            ::..|:.||.|:|.:...|.|::.:..:|......:|.||:.|...::.::||||:.:|:||||:
Mouse   315 KERKRRKEEEVQQQKLAEERRRQNLQEEKERKLECLPPEPSPDDPESVKIIFKLPNDSRVERRFH 379

  Fly   391 QTDSVLDVYHYLFCHPDSPDEFEITTNFPKRVLFSKANLDAAGETGTAKETLTKTLQAVGLKNRE 455
            .:.|:..::.:||...:||::|:|..|||:|||....:.:...         ..|||..||.:.|
Mouse   380 FSQSLTVIHDFLFSLKESPEKFQIEANFPRRVLPCVPSEEWPN---------PPTLQEAGLSHTE 435

  Fly   456 VLFVNDL 462
            ||||.||
Mouse   436 VLFVQDL 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Faf2NP_001286057.1 UBA_FAF2 12..49 CDD:270597 21/36 (58%)
UAS_ETEA 163..280 CDD:239289 59/116 (51%)
ATP-synt_B <287..>373 CDD:304375 36/85 (42%)
UBQ 373..462 CDD:294102 32/88 (36%)
Faf2NP_848484.2 UBA_FAF2 15..52 CDD:270597 21/36 (58%)
UAS_ETEA 154..269 CDD:239289 61/115 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 300..361 27/60 (45%)
UBX_UBXN3B 362..441 CDD:340537 26/78 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831615
Domainoid 1 1.000 234 1.000 Domainoid score I2382
eggNOG 1 0.900 - - E1_KOG1363
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8753
Inparanoid 1 1.050 346 1.000 Inparanoid score I2299
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53584
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005640
OrthoInspector 1 1.000 - - oto93648
orthoMCL 1 0.900 - - OOG6_102329
Panther 1 1.100 - - LDO PTHR23322
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2328
SonicParanoid 1 1.000 - - X5289
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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