DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Faf2 and faf2

DIOPT Version :10

Sequence 1:NP_477388.1 Gene:Faf2 / 35129 FlyBaseID:FBgn0025608 Length:464 Species:Drosophila melanogaster
Sequence 2:NP_001039235.1 Gene:faf2 / 734096 XenbaseID:XB-GENE-948050 Length:445 Species:Xenopus tropicalis


Alignment Length:458 Identity:190/458 - (41%)
Similarity:272/458 - (59%) Gaps:25/458 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LTNEQTEKVLQFQDLTGIEDMNVCRDVLIRHQWDLEVAFQEQLNIREGRPTMFAASTDVRAPAVL 70
            |:.|||||:||||||||||.|:.||..|.:|.|::|.|.|::||.:||.|::|  :|....|   
 Frog     9 LSQEQTEKLLQFQDLTGIESMDQCRQTLQQHNWNIEAAVQDRLNEQEGVPSVF--NTTPNRP--- 68

  Fly    71 NDRFLQQVFSANMPGGRTVSRVPSGPVPRSFTGIIGYVINFVFQYFYSTLTSIVSAFVNLGGGNE 135
                    ...|....|..|.|.|.|.||...|...|:|...|:..|.||..|....|.....:.
 Frog    69 --------LQVNTADHRVYSYVVSRPQPRGLLGWGYYLIMLPFRITYYTLLDIFRFAVRFIRPDP 125

  Fly   136 ARLVTDPLGDVMKFIREYYERYPE-HPVFYQGTYAQALNDAKQELRFLIVYLHKDPAKNPDVESF 199
            ...||||:|||:.||:.:.|:|.. |||||||||:|||||||||||||:||||.:  .:.|.:.|
 Frog   126 RSRVTDPVGDVVSFIQLFEEKYGRIHPVFYQGTYSQALNDAKQELRFLLVYLHGE--DHQDSDDF 188

  Fly   200 CRNTLSARSVIDYINTHTLLWGCDVATPEGYRVMQSITVRSYPTMVMISLRANRMMIVGRFEGDC 264
            |||||....|.:::|:..|.|.|....|||:||.|::...:||.:.||.|:..||.:|||.||..
 Frog   189 CRNTLCIPEVTNFLNSRMLFWACSTNKPEGFRVSQALRENTYPFLAMIMLKDRRMTVVGRLEGLI 253

  Fly   265 TPEELLRRLQSVTNANEVWLSQARADRLERNFTQTLRRQQDEAYEQSLLADEEKERQRQRERDAV 329
            .|::|:.:|..:..||:.:|...|.:|.|||.||.||:||||||..||.||:||||:::.:::..
 Frog   254 QPQDLINQLTFIVEANQTYLVSERLEREERNQTQVLRQQQDEAYLASLRADQEKERKKKEKQEQK 318

  Fly   330 RQAEEAVEQARRDVELRKEEIARQKIELATLVPSEPAADAVGAIAVVFKLPSGTRLERRFNQTDS 394
            |:.||..:..:...|.:|..:..:|...:..:|:||..|....:.::||:|:|||:||||..|.|
 Frog   319 RREEEEAQLKQMLEERKKRNLEEEKERKSECLPAEPVPDHPDNVKIIFKMPNGTRVERRFLFTQS 383

  Fly   395 VLDVYHYLFCHPDSPDEFEITTNFPKRVLFSKANLDAAGETGTAKETLTKTLQAVGLKNREVLFV 459
            :..::.:||...::|::|:|.||||:|||....:.:.         .:..|||..||...::|||
 Frog   384 LSVIHDFLFSLKETPEKFQIVTNFPRRVLPCLPSEEI---------PVPPTLQEAGLSQSQLLFV 439

  Fly   460 NDL 462
            .||
 Frog   440 QDL 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Faf2NP_477388.1 UBA_FAF2 12..49 CDD:270597 21/36 (58%)
UAS_ETEA 163..280 CDD:239289 56/116 (48%)
PDCD7 267..>370 CDD:464979 38/102 (37%)
UBX_UBXN3B 373..461 CDD:340537 32/87 (37%)
faf2NP_001039235.1 UBA_FAF2 15..52 CDD:270597 21/36 (58%)
UAS_ETEA 154..269 CDD:239289 56/116 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 303..354 13/50 (26%)
UBX_UBXN3B 362..441 CDD:340537 32/87 (37%)

Return to query results.
Submit another query.