DRSC/TRiP Functional Genomics Resources

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Protein Alignment Faf2 and faf2

DIOPT Version :10

Sequence 1:NP_477388.1 Gene:Faf2 / 35129 FlyBaseID:FBgn0025608 Length:464 Species:Drosophila melanogaster
Sequence 2:NP_001122152.1 Gene:faf2 / 497596 ZFINID:ZDB-GENE-050208-312 Length:445 Species:Danio rerio


Alignment Length:462 Identity:194/462 - (41%)
Similarity:272/462 - (58%) Gaps:25/462 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EADGLTNEQTEKVLQFQDLTGIEDMNVCRDVLIRHQWDLEVAFQEQLNIREGRPTMFAASTDVRA 66
            |...|:..||||:||||||||:|.|:.||..|.:|.|::|.|.|::||.:||.|::|..     .
Zfish     5 EEQELSQAQTEKLLQFQDLTGLESMDQCRRTLEQHNWNIEAAVQDRLNEQEGVPSVFNP-----P 64

  Fly    67 PAVLNDRFLQQVFSANMPGGRTVSRVPSGPVPRSFTGIIGYVINFVFQYFYSTLTSIVSAFVNLG 131
            ||    |.||    .|....|..|.:.|.|.||...|...|:|...|::.|.||..|....:...
Zfish    65 PA----RPLQ----VNTTDHRVYSYIVSRPQPRGLIGWSYYLIMLPFRFTYYTLLDIFRFALRFI 121

  Fly   132 GGNEARLVTDPLGDVMKFIREYYERY-PEHPVFYQGTYAQALNDAKQELRFLIVYLHKDPAKNPD 195
            ..:....||||:||||.||..:.|:| ..|||||||||:|||||||:|||:|:||||.:  .:.|
Zfish   122 RPDPRGRVTDPVGDVMSFIHSFEEKYGRSHPVFYQGTYSQALNDAKRELRYLLVYLHGE--DHQD 184

  Fly   196 VESFCRNTLSARSVIDYINTHTLLWGCDVATPEGYRVMQSITVRSYPTMVMISLRANRMMIVGRF 260
            .:.|||:||.:...:.:|||..|.|.|..:.||||||.|::...:||.:.||.|:..:|.:|||.
Zfish   185 TDEFCRSTLCSEEALTFINTRMLFWACSTSKPEGYRVSQALRENTYPFLAMIMLKDRKMTVVGRL 249

  Fly   261 EGDCTPEELLRRLQSVTNANEVWLSQARADRLERNFTQTLRRQQDEAYEQSLLADEEKERQRQRE 325
            ||...||:|:.:|..:..||:.:|...|.:|.|||.||.||:|||||||.||.||:||:|:::.|
Zfish   250 EGLIQPEDLINQLTFIMEANQTYLMSERLEREERNQTQVLRQQQDEAYEASLRADQEKDRKKREE 314

  Fly   326 RDAVRQAEEAVEQARRDVELRKEEIARQKIELATLVPSEPAADAVGAIAVVFKLPSGTRLERRFN 390
            ::..||.||.|.|.....|.|:..:..:|...:..:|:||..|....:.:||:||:.||:||||.
Zfish   315 QEQKRQEEEKVRQTVLAEERRRRTLEEEKERRSECLPAEPPVDDPDGVKIVFRLPNDTRVERRFL 379

  Fly   391 QTDSVLDVYHYLFCHPDSPDEFEITTNFPKRVLFSKANLDAAGETGTAKETLTKTLQAVGLKNRE 455
            ...|:..::.:||...::|::|::.||:|:|||..         ..|..|....||...||...|
Zfish   380 FGQSLTVIHDFLFSLKETPEKFQVVTNYPRRVLPC---------LPTEDEPNPPTLMEAGLSRSE 435

  Fly   456 VLFVNDL 462
            ||||.||
Zfish   436 VLFVQDL 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Faf2NP_477388.1 UBA_FAF2 12..49 CDD:270597 20/36 (56%)
UAS_ETEA 163..280 CDD:239289 55/116 (47%)
PDCD7 267..>370 CDD:464979 43/102 (42%)
UBX_UBXN3B 373..461 CDD:340537 32/87 (37%)
faf2NP_001122152.1 UBA_FAF2 15..52 CDD:270597 20/36 (56%)
UAS_ETEA 154..269 CDD:239289 55/116 (47%)
UBX_UBXN3B 362..441 CDD:340537 32/87 (37%)

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