DRSC/TRiP Functional Genomics Resources

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Protein Alignment Faf2 and faf2

DIOPT Version :9

Sequence 1:NP_001286057.1 Gene:Faf2 / 35129 FlyBaseID:FBgn0025608 Length:464 Species:Drosophila melanogaster
Sequence 2:NP_001122152.1 Gene:faf2 / 497596 ZFINID:ZDB-GENE-050208-312 Length:445 Species:Danio rerio


Alignment Length:462 Identity:194/462 - (41%)
Similarity:272/462 - (58%) Gaps:25/462 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EADGLTNEQTEKVLQFQDLTGIEDMNVCRDVLIRHQWDLEVAFQEQLNIREGRPTMFAASTDVRA 66
            |...|:..||||:||||||||:|.|:.||..|.:|.|::|.|.|::||.:||.|::|..     .
Zfish     5 EEQELSQAQTEKLLQFQDLTGLESMDQCRRTLEQHNWNIEAAVQDRLNEQEGVPSVFNP-----P 64

  Fly    67 PAVLNDRFLQQVFSANMPGGRTVSRVPSGPVPRSFTGIIGYVINFVFQYFYSTLTSIVSAFVNLG 131
            ||    |.||    .|....|..|.:.|.|.||...|...|:|...|::.|.||..|....:...
Zfish    65 PA----RPLQ----VNTTDHRVYSYIVSRPQPRGLIGWSYYLIMLPFRFTYYTLLDIFRFALRFI 121

  Fly   132 GGNEARLVTDPLGDVMKFIREYYERY-PEHPVFYQGTYAQALNDAKQELRFLIVYLHKDPAKNPD 195
            ..:....||||:||||.||..:.|:| ..|||||||||:|||||||:|||:|:||||.:  .:.|
Zfish   122 RPDPRGRVTDPVGDVMSFIHSFEEKYGRSHPVFYQGTYSQALNDAKRELRYLLVYLHGE--DHQD 184

  Fly   196 VESFCRNTLSARSVIDYINTHTLLWGCDVATPEGYRVMQSITVRSYPTMVMISLRANRMMIVGRF 260
            .:.|||:||.:...:.:|||..|.|.|..:.||||||.|::...:||.:.||.|:..:|.:|||.
Zfish   185 TDEFCRSTLCSEEALTFINTRMLFWACSTSKPEGYRVSQALRENTYPFLAMIMLKDRKMTVVGRL 249

  Fly   261 EGDCTPEELLRRLQSVTNANEVWLSQARADRLERNFTQTLRRQQDEAYEQSLLADEEKERQRQRE 325
            ||...||:|:.:|..:..||:.:|...|.:|.|||.||.||:|||||||.||.||:||:|:::.|
Zfish   250 EGLIQPEDLINQLTFIMEANQTYLMSERLEREERNQTQVLRQQQDEAYEASLRADQEKDRKKREE 314

  Fly   326 RDAVRQAEEAVEQARRDVELRKEEIARQKIELATLVPSEPAADAVGAIAVVFKLPSGTRLERRFN 390
            ::..||.||.|.|.....|.|:..:..:|...:..:|:||..|....:.:||:||:.||:||||.
Zfish   315 QEQKRQEEEKVRQTVLAEERRRRTLEEEKERRSECLPAEPPVDDPDGVKIVFRLPNDTRVERRFL 379

  Fly   391 QTDSVLDVYHYLFCHPDSPDEFEITTNFPKRVLFSKANLDAAGETGTAKETLTKTLQAVGLKNRE 455
            ...|:..::.:||...::|::|::.||:|:|||..         ..|..|....||...||...|
Zfish   380 FGQSLTVIHDFLFSLKETPEKFQVVTNYPRRVLPC---------LPTEDEPNPPTLMEAGLSRSE 435

  Fly   456 VLFVNDL 462
            ||||.||
Zfish   436 VLFVQDL 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Faf2NP_001286057.1 UBA_FAF2 12..49 CDD:270597 20/36 (56%)
UAS_ETEA 163..280 CDD:239289 55/116 (47%)
ATP-synt_B <287..>373 CDD:304375 37/85 (44%)
UBQ 373..462 CDD:294102 32/88 (36%)
faf2NP_001122152.1 UBA_FAF2 15..52 CDD:270597 20/36 (56%)
UAS_ETEA 154..269 CDD:239289 55/116 (47%)
Faf1_like2_UBX 358..442 CDD:176369 32/92 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574669
Domainoid 1 1.000 238 1.000 Domainoid score I2246
eggNOG 1 0.900 - - E1_KOG1363
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8753
Inparanoid 1 1.050 344 1.000 Inparanoid score I2308
OMA 1 1.010 - - QHG53584
OrthoDB 1 1.010 - - D1251507at2759
OrthoFinder 1 1.000 - - FOG0005640
OrthoInspector 1 1.000 - - oto39850
orthoMCL 1 0.900 - - OOG6_102329
Panther 1 1.100 - - LDO PTHR23322
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2328
SonicParanoid 1 1.000 - - X5289
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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