DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Faf2 and faf1

DIOPT Version :10

Sequence 1:NP_477388.1 Gene:Faf2 / 35129 FlyBaseID:FBgn0025608 Length:464 Species:Drosophila melanogaster
Sequence 2:NP_998138.2 Gene:faf1 / 406243 ZFINID:ZDB-GENE-040426-2863 Length:675 Species:Danio rerio


Alignment Length:471 Identity:121/471 - (25%)
Similarity:196/471 - (41%) Gaps:121/471 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 VLNDRFLQQVFSANMPGGRTVSRV--------------------PSGPVPRSFTGIIGYVINFVF 113
            |::.|..|:.:|.|.|..:|:..|                    |:.....|.|..|.   ...:
Zfish   223 VISHREAQRDYSLNFPASKTIQEVKRNISDLTNIPVRHQQWDGWPASATDDSMTLAIS---GISY 284

  Fly   114 QYFYSTLTSIVSAFVNLGGGNE---ARLVTDPLGD------------------------------ 145
            ...:.|:....|..:.:...:|   ..:|:|..||                              
Zfish   285 PCHHLTVCRRSSPALTVDQTDECTDVHMVSDSEGDDFEDAPEFGVDESEIFGMGSSSCRKSPMMP 349

  Fly   146 ---------VMKFIREYYERYPE-HPVFYQGTYAQALNDA----KQELRFLIVYLHKDPAKNPDV 196
                     ::.|..|:..||.: |||||.|:...|..:|    .::.:.|.:|||.|.:...:|
Zfish   350 ENSENEGDALLHFTAEFSRRYGDCHPVFYIGSLEAASQEAFYGKARDRKLLAIYLHNDESVLSNV 414

  Fly   197 ESFCRNTLSARSVIDYINTHTLLWGCDVATPE--------------GYRVMQSITVRSYPT---- 243
              ||...:.|.|::.|::.:.:.|..|| |.|              |..|.|  |:|:|.|    
Zfish   415 --FCSQMMCADSIVSYLSQNFITWAWDV-TKEANKARLLTMCTRHFGSVVAQ--TIRTYKTDQFP 474

  Fly   244 ---MVMISLRANRMMIVGRFEGDCTPEELLRRLQSVTNANEVWLSQAR---ADRLERNFTQTLRR 302
               :||....:|.::.|  .:|:.|.:||:.||.   .|.|::.:|.:   .|..||...:.::|
Zfish   475 LLLIVMGKRTSNEVLNV--IQGNTTVDELMMRLM---GAMEIFTAQQQEDIKDEDEREAREMVKR 534

  Fly   303 QQDEAYEQSLLADEEK-ERQRQRERDAVRQAEEAVEQARRDVELRKEEIARQKIELATLVPSEPA 366
            :|||||..||.||.:| |.|.:.|.:.|||     |:.|::.|..:|.|   ::.|...:|.||.
Zfish   535 EQDEAYRVSLEADRKKREAQEREEAEQVRQ-----ERIRKEQEEEREAI---RLSLEQALPPEPK 591

  Fly   367 ADAVGAIAVV-FKLPSGTRLERRFNQTDSVLDVYHYLFCHPDSPDEFEITTNFPKRVLFSKANLD 430
            .:....|:.: .:.|||..|||||..|..:..::.::.......|||::.|.||:|.:   ..||
Zfish   592 EEGGEPISKLRIRTPSGEFLERRFLGTCKLQVLFDFVASKGYPSDEFKLLTTFPRRNI---TQLD 653

  Fly   431 AAGETGTAK----ETL 442
            .|.....||    |||
Zfish   654 PAWNLVEAKLFPQETL 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Faf2NP_477388.1 UBA_FAF2 12..49 CDD:270597
UAS_ETEA 163..280 CDD:239289 38/141 (27%)
PDCD7 267..>370 CDD:464979 36/106 (34%)
UBX_UBXN3B 373..461 CDD:340537 25/75 (33%)
faf1NP_998138.2 UBA_FAF1 16..48 CDD:270596
Ubl1_FAF1 126..198 CDD:340649
Ubl2_FAF1 219..294 CDD:340650 13/73 (18%)
UAS_FAF1 377..512 CDD:239288 40/144 (28%)
DUF5401 <486..>603 CDD:375164 41/129 (32%)
UBX_UBXN3A 596..674 CDD:340469 25/77 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.