DRSC/TRiP Functional Genomics Resources

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Protein Alignment Faf2 and CG8892

DIOPT Version :9

Sequence 1:NP_001286057.1 Gene:Faf2 / 35129 FlyBaseID:FBgn0025608 Length:464 Species:Drosophila melanogaster
Sequence 2:NP_001260064.1 Gene:CG8892 / 33719 FlyBaseID:FBgn0031664 Length:496 Species:Drosophila melanogaster


Alignment Length:531 Identity:95/531 - (17%)
Similarity:159/531 - (29%) Gaps:195/531 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 AFQEQL------NIREGRPTMFAASTDVRAPAVLNDRFLQQVFSANMPGGRTVS----------- 90
            |..||:      ::.|.:..:.|.:.||.|...|   |.:|..|.:.|.|.:..           
  Fly     9 ALVEQVREVTACSMDEAKYYLSACANDVSAAVAL---FFEQAASTSTPSGSSAGAAAESLPVLDD 70

  Fly    91 ----RVPSGPVPRSFTGIIGYVINFVFQYFYSTLTSIVSA--------FVNLGG----------- 132
                |.|..||....  |:....||......|.|:.:...        |...|.           
  Fly    71 EDEVRAPIAPVREQL--ILPEDDNFFASGSSSRLSRVTQRVKVHPLRDFAREGALMEEQLQATGV 133

  Fly   133 ---------GNEARLV-------------------TDPLGDVMKFIREYYERYPEHPVFYQGTYA 169
                     |..|::|                   |..|||:.:         |...:.|.|:..
  Fly   134 YADPNRIRRGRAAQMVVAGQAMALNRRSTTDTATSTSRLGDLFR---------PPTDILYSGSLT 189

  Fly   170 QALNDAKQELRFLIVYLHKDPAKNPDVESFCRNTLSARSVIDYINTHTLLWGCDVATPEGYRVMQ 234
            .|...|.:..|:|:|.:..:   |...::..|:..|.:.:...|......|..|..|.||.|.:.
  Fly   190 AAREFATKRQRWLLVNVQDE---NFQSQTLNRDVWSDKELKKLIRRQFTFWQVDNDTSEGRRFVA 251

  Fly   235 SITVRSYPTMVMISLRANRMMIVGRFEGDCTPEELLRRLQSVTNANEVWLS-QARADRLERNFTQ 298
            .....:.|.:.:|..|                           ...|||.| :.:.:.:..:..|
  Fly   252 FYHCATLPYICVIDPR---------------------------TGEEVWRSAEPKLENILPDLRQ 289

  Fly   299 TLRRQQDEAYEQ---------SLLADEE--------------KERQRQRERDAVRQAEEAVEQAR 340
            .|:..:|...|.         :.:.|:|              ||..::|.:......||.:|.|.
  Fly   290 FLKEHRDFIQEDAPGTSKRSATYIDDDEVPDPEASCSSTASSKEMPKKRAKVLELTEEEQLELAI 354

  Fly   341 R---------------------------------DVELR-------KEEIARQKIELATLVPSEP 365
            :                                 |.||:       :..:...|.||..|  ...
  Fly   355 KNSINENGGGGGEGNQKNDSPDGASDNESLEEFDDEELKGVAAASFENHLGEAKTELTAL--KLR 417

  Fly   366 AADAVGAIAVV-FKLPSGTRLER---RFNQTDSVLDVYHYLFCHPDSP-DEFEITTNFPKRVLFS 425
            ..:|.|...:| .:.||.|:|:.   ..:||            |...| |.:::...||::.|.:
  Fly   418 LLNAAGTDEMVQLRWPSDTKLQTLRLYISQT------------HKHIPQDGYKLICAFPRKFLEA 470

  Fly   426 KANLDAAGETG 436
            :.|..:..|.|
  Fly   471 EHNDSSLKELG 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Faf2NP_001286057.1 UBA_FAF2 12..49 CDD:270597 3/11 (27%)
UAS_ETEA 163..280 CDD:239289 20/116 (17%)
ATP-synt_B <287..>373 CDD:304375 22/148 (15%)
UBQ 373..462 CDD:294102 16/69 (23%)
CG8892NP_001260064.1 UBA_4 9..46 CDD:291236 10/39 (26%)
UAS 183..294 CDD:239256 26/140 (19%)
UBQ 412..488 CDD:294102 19/84 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23322
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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