DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Faf2 and FAF1

DIOPT Version :9

Sequence 1:NP_001286057.1 Gene:Faf2 / 35129 FlyBaseID:FBgn0025608 Length:464 Species:Drosophila melanogaster
Sequence 2:NP_008982.1 Gene:FAF1 / 11124 HGNCID:3578 Length:650 Species:Homo sapiens


Alignment Length:349 Identity:95/349 - (27%)
Similarity:168/349 - (48%) Gaps:58/349 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 GD-VMKFIREYYERYPE-HPVFYQGTYAQALNDA----KQELRFLIVYLHKDPAKNPDVESFCRN 202
            || :::|..|:..||.: ||||:.|:...|..:|    .::.:.|.:|||.|.:...:|  ||..
Human   331 GDALLQFTAEFSSRYGDCHPVFFIGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNV--FCSQ 393

  Fly   203 TLSARSVIDYINTHTLLWGCDVATPEGYRVMQSITVRSYPTMVMISLRANR-------MMIVGR- 259
            .|.|.|::.|::.:.:.|..|:..........::..|.:.::|..::|..:       ::|:|: 
Human   394 MLCAESIVSYLSQNFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQFPLFLIIMGKR 458

  Fly   260 --------FEGDCTPEELLRRLQSVTNANEVWLSQAR---ADRLERNFTQTLRRQQDEAYEQSLL 313
                    .:|:.|.:||:.||.:   |.|::.:|.:   .|..||...:.::|:|||||..||.
Human   459 SSNEVLNVIQGNTTVDELMMRLMA---AMEIFTAQQQEDIKDEDEREARENVKREQDEAYRLSLE 520

  Fly   314 ADEEKERQRQRERDAVRQAEE-AVEQARRDVELRKEEIARQKIELATLVPSEPA---ADAVGAIA 374
            ||..|....:||     .||: .:||.|::.|..:|.|   ::.|...:|.||.   |:.|..:.
Human   521 ADRAKREAHERE-----MAEQFRLEQIRKEQEEEREAI---RLSLEQALPPEPKEENAEPVSKLR 577

  Fly   375 VVFKLPSGTRLERRFNQTDSVLDVYHYLFCHPDSPDEFEITTNFPKRVLFSKANLDAAGETGTAK 439
            :  :.|||..|||||..::.:..|:.::.......||:::.:.||:|   ....||.        
Human   578 I--RTPSGEFLERRFLASNKLQIVFDFVASKGFPWDEYKLLSTFPRR---DVTQLDP-------- 629

  Fly   440 ETLTKTLQAVGLKNREVLFVNDLE 463
               .|:|..|.|..:|.||:...|
Human   630 ---NKSLLEVKLFPQETLFLEAKE 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Faf2NP_001286057.1 UBA_FAF2 12..49 CDD:270597
UAS_ETEA 163..280 CDD:239289 29/136 (21%)
ATP-synt_B <287..>373 CDD:304375 30/92 (33%)
UBQ 373..462 CDD:294102 23/88 (26%)
FAF1NP_008982.1 UBA_FAF1 14..46 CDD:270596
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 62..87
UAS_FAF1 352..487 CDD:239288 31/139 (22%)
Stathmin <471..559 CDD:279209 33/98 (34%)
Faf1_UBX 570..649 CDD:176366 25/94 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1363
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2328
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.