DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jwa and PRA1.A1

DIOPT Version :10

Sequence 1:NP_609901.6 Gene:Jwa / 35128 FlyBaseID:FBgn0032704 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_195824.1 Gene:PRA1.A1 / 831904 AraportID:AT5G02040 Length:209 Species:Arabidopsis thaliana


Alignment Length:183 Identity:50/183 - (27%)
Similarity:82/183 - (44%) Gaps:26/183 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 PLRTLDDFILGSARFQLPNLKDFEKWGNRVVKNLLYYQTNYFLLFITIYVLMIFFNPSKIITGLL 87
            |.|...:|.   :||.:|  |...||.:|:..||.||:||||::.:.|..|.:...|..|...||
plant    23 PPRPPSEFF---SRFTVP--KSVPKWDSRLKCNLYYYRTNYFIMIVVILGLGVLTRPLAIFAALL 82

  Fly    88 VQALIIGVIWQFFSG-------KSKKNF---IASRL-------TGG---NANAAEQNAQQKWYIL 132
            . ||.:..:...|:|       ::.:.|   :|:::       |.|   :..|.....|.:|..:
plant    83 T-ALSLAFLNDSFAGSFSEKATRTVRRFSPQLAAKMRPPLTPVTRGRPSSKRAIHVCGQPRWVFV 146

  Fly   133 AGALLGGYLLLHLLSAVLLTIFTVLLPISLTFIHASLRLRNIKNKLTNSIESF 185
            ....|..:.|.::.|.:|.....:|:....|.:|||||..|:|.:.....|.|
plant   147 LTCSLVSFALWYISSGLLRVSVALLIAHLATILHASLRTPNLKARFNTFREEF 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JwaNP_609901.6 PRA1 20..178 CDD:460846 48/174 (28%)
PRA1.A1NP_195824.1 PRA1 19..192 CDD:460846 48/174 (28%)

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