DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jwa and PRA1.A1

DIOPT Version :9

Sequence 1:NP_609901.5 Gene:Jwa / 35128 FlyBaseID:FBgn0032704 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_195824.1 Gene:PRA1.A1 / 831904 AraportID:AT5G02040 Length:209 Species:Arabidopsis thaliana


Alignment Length:183 Identity:50/183 - (27%)
Similarity:82/183 - (44%) Gaps:26/183 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 PLRTLDDFILGSARFQLPNLKDFEKWGNRVVKNLLYYQTNYFLLFITIYVLMIFFNPSKIITGLL 129
            |.|...:|.   :||.:|  |...||.:|:..||.||:||||::.:.|..|.:...|..|...||
plant    23 PPRPPSEFF---SRFTVP--KSVPKWDSRLKCNLYYYRTNYFIMIVVILGLGVLTRPLAIFAALL 82

  Fly   130 VQALIIGVIWQFFSG-------KSKKNF---IASRL-------TGG---NANAAEQNAQQKWYIL 174
            . ||.:..:...|:|       ::.:.|   :|:::       |.|   :..|.....|.:|..:
plant    83 T-ALSLAFLNDSFAGSFSEKATRTVRRFSPQLAAKMRPPLTPVTRGRPSSKRAIHVCGQPRWVFV 146

  Fly   175 AGALLGGYLLLHLLSAVLLTIFTVLLPISLTFIHASLRLRNIKNKLTNSIESF 227
            ....|..:.|.::.|.:|.....:|:....|.:|||||..|:|.:.....|.|
plant   147 LTCSLVSFALWYISSGLLRVSVALLIAHLATILHASLRTPNLKARFNTFREEF 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JwaNP_609901.5 PRA1 62..220 CDD:281235 48/174 (28%)
PRA1.A1NP_195824.1 PRA1 19..192 CDD:397359 48/174 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 55 1.000 Domainoid score I4105
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 57 1.000 Inparanoid score I2578
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1288023at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12859
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.070

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