DRSC/TRiP Functional Genomics Resources

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Protein Alignment Jwa and Praf2

DIOPT Version :10

Sequence 1:NP_609901.6 Gene:Jwa / 35128 FlyBaseID:FBgn0032704 Length:207 Species:Drosophila melanogaster
Sequence 2:NP_001102483.1 Gene:Praf2 / 367743 RGDID:1566287 Length:178 Species:Rattus norvegicus


Alignment Length:194 Identity:73/194 - (37%)
Similarity:95/194 - (48%) Gaps:31/194 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LQLPPLRTLDDFILGSARFQLPNLKDFEKWGNRVVKNLLYYQTNYFLLFITIYVLMIFFNPSKII 83
            ::|||||.||||:|||||...|:|.|.::|.:||:.|||||||||.|.|.....|..:..|...:
  Rat     4 VRLPPLRALDDFVLGSARLAAPDLGDPQRWCHRVINNLLYYQTNYLLCFGISLALAGYIRPLHTL 68

  Fly    84 TGLLVQALIIGV-IWQFFSGKSKKNFIASRLTGGNANAAEQNA-------QQKWYILAGALLGGY 140
            ...||.|:.:|| :|                      |||..|       ......||..|....
  Rat    69 LSALVVAVALGVLVW----------------------AAETRAAVRRCRRSHPAACLAAVLAVSL 111

  Fly   141 LLLHLLSAVLLTIFTVLLPISLTFIHASLRLRNIKNKLTNSIESFA-PSTPMGSLLDALNVRAE 203
            .:|..:......:..:..|:.|..:||||||||:|||:.|.|||.. ..||||.||:||....|
  Rat   112 FILWAVGGAFTFLLCITAPVLLILLHASLRLRNLKNKIENKIESIGLKRTPMGLLLEALGQEQE 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
JwaNP_609901.6 PRA1 20..178 CDD:460846 59/165 (36%)
Praf2NP_001102483.1 PRA1 4..148 CDD:460846 58/165 (35%)

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