DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10343 and Rwdd4

DIOPT Version :9

Sequence 1:NP_609900.1 Gene:CG10343 / 35127 FlyBaseID:FBgn0032703 Length:214 Species:Drosophila melanogaster
Sequence 2:NP_001030166.1 Gene:Rwdd4 / 502084 RGDID:1564132 Length:188 Species:Rattus norvegicus


Alignment Length:189 Identity:89/189 - (47%)
Similarity:123/189 - (65%) Gaps:5/189 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EQQTEEREALQSIYEGDTNFKEIDSVTFQYKYGEEDNYKSFLVELKWGENYPDEAPAINMNAFYN 70
            |.|..|.|||:||||||.:|:|:..|:|||:.||:.:.|:||:|:.|.|.||...|.|:||||:|
  Rat     5 EDQEMELEALRSIYEGDESFRELSPVSFQYRIGEDGDPKAFLIEISWTETYPQTPPVISMNAFFN 69

  Fly    71 RNLLPAVKEGIQTALSTEADQWLGCGMTYTLFECLKDNLEQLTAEQPESAPTVALVDDGVGALKI 135
            ..:..|||:.|...|....:..||..|||||||..|||.||........:.|..:.:    .:.:
  Rat    70 NTISSAVKQSILAKLQEAVEVNLGTAMTYTLFEYAKDNKEQFMENHHPGSSTTPIAN----IISV 130

  Fly   136 SDPNADAESKKKEPKKEHLTKAQKRRQWERTDHKGDRERGWDWVDLVKHLSQTGGKNDD 194
            ..|:|...||||: |||.|:|||||:..::|||||:..|||:|||:|||||::|.|:|:
  Rat   131 ETPSAAPSSKKKD-KKEQLSKAQKRKLADKTDHKGELPRGWNWVDVVKHLSKSGSKDDE 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10343NP_609900.1 RWD 6..109 CDD:283440 51/102 (50%)
Rwdd4NP_001030166.1 RWD 4..107 CDD:283440 50/101 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 132..167 20/35 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340696
Domainoid 1 1.000 109 1.000 Domainoid score I6262
eggNOG 1 0.900 - - E1_KOG4018
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H16059
Inparanoid 1 1.050 179 1.000 Inparanoid score I3914
OMA 1 1.010 - - QHG60079
OrthoDB 1 1.010 - - D1549838at2759
OrthoFinder 1 1.000 - - FOG0007865
OrthoInspector 1 1.000 - - oto97169
orthoMCL 1 0.900 - - OOG6_107532
Panther 1 1.100 - - LDO PTHR21275
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5820
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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