DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10376 and ppm1f

DIOPT Version :9

Sequence 1:NP_609899.1 Gene:CG10376 / 35126 FlyBaseID:FBgn0032702 Length:428 Species:Drosophila melanogaster
Sequence 2:NP_001018165.1 Gene:ppm1f / 553757 ZFINID:ZDB-GENE-051128-2 Length:424 Species:Danio rerio


Alignment Length:384 Identity:119/384 - (30%)
Similarity:193/384 - (50%) Gaps:23/384 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 VSGEERHAELVSAIWKQLETRGCPAQFRIKLLHRSTQQLEQDLCFAKECEVTVEGPPQYDLLKLQ 115
            :|.:|...|.:....:.|..|..|:.....:.:.:..:|.:|......|....|..|:.:    |
Zfish    39 ISLQELKGESLDLGLRLLSARNAPSWLAAVMCNVAVTELLKDDLTPHYCPKDPEQQPEDE----Q 99

  Fly   116 KFVASEFEKYILKLTDNSEVDRLKDFADEAAPENCECHQQKEPLHTSAAVKNKPRKMEDRCVCLD 180
            ..|..:.|. :|:|..|..  |....|.:..|.|.:....:....:..|::|..||||||.|.|.
Zfish   100 GVVLLQSEP-VLRLFINKL--RAVGVAWQKQPPNPDAPSSRTHSCSVHAIRNTRRKMEDRHVILK 161

  Fly   181 RFGEMYELLDKTTR-FFGVFDGHSGSLSATYATSQLPQLLADQLKANPDPAAFSPDFYRNAFESA 244
            .|.::..|.|...| ::.|||||.|..:|||:.:.|..:|:.|.:...|.|        .||::.
Zfish   162 EFNQLLGLQDGVGREYYAVFDGHGGVDAATYSATHLHIVLSQQGELKTDAA--------TAFKNT 218

  Fly   245 FLLADERF----TQKKITSGTTSVCALITKDQLYIAWVGDSKALLVGKRTQLQLVKPHKPENPDE 305
            |...|:.|    .::::.||:|.|..|:|.|.|.::|:|||:||||.:...:.|:.|||||..||
Zfish   219 FTQTDDMFKIKAKRERLRSGSTGVAVLLTSDLLTVSWLGDSQALLVRQGEPVTLMDPHKPEREDE 283

  Fly   306 RKRIETAGGTVLHAQGQWRVNGILNVARSIGDYSLEAVIA-EPDFVDVQLNEAHDFLVLGTDGLW 369
            :||||..||.:.. .|.|||||...|:|:|||:..:..:: |.|.....|....|:::|..||.:
Zfish   284 KKRIEDLGGCIAF-MGCWRVNGTYAVSRAIGDFDQKPYVSNEADSSSFHLTGDEDYVLLACDGFF 347

  Fly   370 DHVPESLIIETVYDSLADTTMKLDDIPKLLIEAAKERDSQDNITAVVVLLK-PRHQIEH 427
            |.:..:.:...|.::|.::....:|:.:.|:..||...|.||||.::|.|| |:..:.|
Zfish   348 DVIRPADVPALVLEALRESGGSGNDVAQSLVAQAKTAGSSDNITVLLVFLKEPQKLLAH 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10376NP_609899.1 PP2Cc 160..419 CDD:238083 94/264 (36%)
ppm1fNP_001018165.1 PP2Cc 140..397 CDD:238083 94/265 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577912
Domainoid 1 1.000 150 1.000 Domainoid score I4352
eggNOG 1 0.900 - - E1_COG0631
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H22828
Inparanoid 1 1.050 163 1.000 Inparanoid score I4185
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1044139at2759
OrthoFinder 1 1.000 - - FOG0002007
OrthoInspector 1 1.000 - - otm24571
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR13832
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R955
SonicParanoid 1 1.000 - - X119
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.890

Return to query results.
Submit another query.