DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10338 and rusf1

DIOPT Version :9

Sequence 1:NP_001286056.1 Gene:CG10338 / 35124 FlyBaseID:FBgn0032700 Length:417 Species:Drosophila melanogaster
Sequence 2:XP_005164087.1 Gene:rusf1 / 555936 ZFINID:ZDB-GENE-070410-89 Length:435 Species:Danio rerio


Alignment Length:386 Identity:159/386 - (41%)
Similarity:230/386 - (59%) Gaps:23/386 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 VLQKVFLPKGYPDSVSEDYAAYQIWDTAQAFCSTICGTLCTHAILKGIGVGSENINAFSATATWI 112
            |.:.||||:|||:||||||..||:|||.|||.|::.|||.|.|.|:|:|||::.....:||.||:
Zfish    50 VFKSVFLPQGYPESVSEDYLQYQLWDTVQAFSSSLSGTLATQASLRGVGVGNQEATVAAATITWL 114

  Fly   113 LKEGSGHVGRIVFAWWQGSQLDVDSKKWRLRADFLNDLAMGIEIYVLPKYPHFSTQILCCSTLLK 177
            |::|:|.:|||:|||.:||:||.::|||||.||.|||:||.||| ..|.:|.|.|.|:|.:.:.|
Zfish   115 LRDGTGMLGRILFAWLKGSKLDSEAKKWRLFADILNDVAMFIEI-AAPHFPPFFTIIVCIAGIFK 178

  Fly   178 AIVGVAGGATRSALTQHHALRGNLADVASKDSSQETCVNLVASFVGLYLLSLIKSQAVL-YTIFY 241
            :||||||||||:|||.|.|.|.|:||:::||.||||.|||....|.|.|:.|:....:| :.:||
Zfish   179 SIVGVAGGATRAALTVHQARRNNMADISAKDGSQETLVNLAGLLVSLALIPLVTDNPLLTFILFY 243

  Fly   242 VVVSLHLYANLKAVRAVCLRSFNESRYLIALEEFFRSSRMLSPQQVNAMERVTVG--QTVSVSLN 304
            :...|||:||.||||:|.:.:.||:|..|.|.::....::|||.:.|..|.|.:.  :||.:.|.
Zfish   244 LFTVLHLFANYKAVRSVVMETLNEARLSIVLHQYLLHGQVLSPAEANQREPVFLSFRRTVPIKLG 308

  Fly   305 IKLG----------LSVKNLIDEY----KSSSVIENIVSSFDPHEHFIIAQTKKCLGVYLHFETR 355
            ::||          |::||....|    |:.:|...:.|.....:.........|:...||.|: 
Zfish   309 VRLGDLIHEPGDLQLALKNNSKPYLIGIKNGAVCVCLGSDASVDDEIKAVCQALCVSAVLHNES- 372

  Fly   356 PQDVLKAYFFAVSYLQDRNQL-KEKYWDIQTKWQEFLALAQQEGWLIHHHLLLVDEYRLDW 415
               .|.|....:|..:|...| .:.:..|...:|.||....:..|.....||..:|:|::|
Zfish   373 ---PLPAVLQQLSNTKDPWALISQSHKMIDEIFQTFLKELDRAKWQTDRTLLDWNEWRVEW 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10338NP_001286056.1 DUF647 40..279 CDD:282708 122/231 (53%)
rusf1XP_005164087.1 DUF647 43..281 CDD:309836 122/231 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582213
Domainoid 1 1.000 249 1.000 Domainoid score I2098
eggNOG 1 0.900 - - E1_KOG4249
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11232
Inparanoid 1 1.050 272 1.000 Inparanoid score I2966
OMA 1 1.010 - - QHG58480
OrthoDB 1 1.010 - - D1357597at2759
OrthoFinder 1 1.000 - - FOG0007387
OrthoInspector 1 1.000 - - oto39152
orthoMCL 1 0.900 - - OOG6_102741
Panther 1 1.100 - - LDO PTHR12770
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4769
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.770

Return to query results.
Submit another query.