DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10338 and rusf1

DIOPT Version :10

Sequence 1:NP_609897.2 Gene:CG10338 / 35124 FlyBaseID:FBgn0032700 Length:417 Species:Drosophila melanogaster
Sequence 2:XP_031748696.1 Gene:rusf1 / 100379891 XenbaseID:XB-GENE-6046012 Length:473 Species:Xenopus tropicalis


Alignment Length:414 Identity:156/414 - (37%)
Similarity:228/414 - (55%) Gaps:52/414 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 FRVLQKVF----LPKGYPDSVSEDYAAYQIWDTAQAFCSTICGTLCTHAILKGIGVGSENINAFS 106
            :|.|:..|    ||.|||||||:||.|||:|||.|||.|::.|:|.|.::|:|.|||.......:
 Frog    62 YRSLRDFFVSLLLPHGYPDSVSKDYLAYQLWDTIQAFSSSVTGSLATQSLLRGSGVGDSTATVAA 126

  Fly   107 ATATWILKEGSGHVGRIVFAWWQGSQLDVDSKKWRLRADFLNDLAMGIEIYVLPKYPHFSTQILC 171
            ||.||||::|:|.||||:|||.:||:||.|:|:|||.||.|||:|:.:|| :.|.:|...|..:|
 Frog   127 ATITWILRDGTGMVGRILFAWMKGSRLDCDAKRWRLFADLLNDIAIFMEI-MAPVFPSCFTLTVC 190

  Fly   172 CSTLLKAIVGVAGGATRSALTQHHALRGNLADVASKDSSQETCVNLVASFVGLYLLSLIK-SQAV 235
            .:.:.|.||||||||||:|:|.|.|.|.|:|||.:||.||||.|||....|.|:|:.|:. |...
 Frog   191 AAGVFKCIVGVAGGATRAAITVHQAKRDNMADVCAKDGSQETLVNLAGLLVSLFLVPLVSDSMMA 255

  Fly   236 LYTIFYVVVSLHLYANLKAVRAVCLRSFNESRYLIALEEFFRSSRMLSPQQVNAMERVTVGQTVS 300
            .|.:|:::..||||||.:|||:|.:.:.|:||..|.|..:.:..::|.|:..|..|.:..|....
 Frog   256 TYLLFFLLTILHLYANYRAVRSVIMETLNQSRLSIVLHHYLKEGKILDPEAANLREPLLPGLGSQ 320

  Fly   301 VSLNIKLGLSVKNLIDEYKSSSVIENIVSSFDPHEHFIIA--QTKKCLGVYLHFETRPQDVLKAY 363
            ..:|:.:.||       |.:|||.|......|.|..:::.  :....|.|.||......|:::|.
 Frog   321 APINLGVPLS-------YLASSVPELEQLKKDNHSLYLLGWREDTGSLAVVLHERASSVDMIRAC 378

  Fly   364 FFA--------------------VSYLQ------DR-----------NQLKEKYWDIQTKWQEFL 391
            ..|                    :|.||      .|           ..|::.:..|.:.:..||
 Frog   379 VHAEMLHRKTSSSDHHKSSSFPILSALQCVRGRGSRPCTGFEQHGRFTALEQTHNQINSMFPTFL 443

  Fly   392 ALAQQEGWLIHHHLLLVDEYRLDW 415
            ......||:.:.:||..|::|.:|
 Frog   444 QGLTASGWVTNRNLLDSDDWRANW 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10338NP_609897.2 UVB_sens_prot 40..279 CDD:428173 119/237 (50%)
rusf1XP_031748696.1 UVB_sens_prot 63..299 CDD:428173 119/236 (50%)

Return to query results.
Submit another query.