DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10336 and AT3G02820

DIOPT Version :10

Sequence 1:NP_609895.2 Gene:CG10336 / 35122 FlyBaseID:FBgn0032698 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_001327085.1 Gene:AT3G02820 / 821018 AraportID:AT3G02820 Length:299 Species:Arabidopsis thaliana


Alignment Length:300 Identity:69/300 - (23%)
Similarity:121/300 - (40%) Gaps:65/300 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 NDNIPTD--PDQLPSDGEGEKLFADDEDNGVEPGSQDAQIVEPKKRAVRNPRPRLTVETLRGPRG 77
            |:::.:.  |.|:|::        :.:.:..:.|:..|.  .||....|..||:||.|.|....|
plant    47 NNSVSSSSAPSQIPNN--------EFQRSSSKSGTSIAP--APKVTKTRVQRPKLTPELLLSEDG 101

  Fly    78 IQTIEDYF-KDIKFKGKGYEKTDLDEVLRRLQHWGHRMYPTYTFDDVLNNIERLGKKKPLQ--VH 139
            :..:..|| |..|::|:|.|.:||..::|....|...:.|.|:||..::.::::...|.::  ::
plant   102 LGYVLRYFPKSFKYRGRGKEVSDLGNLIRLYSEWHTHLLPYYSFDHFVHKVQQVASTKRVKNCIN 166

  Fly   140 MARYRLGQLEQMRAHEAEALEEAQDEQQEGAGDEPFDEFDALLGEQIAMSRLAPPSPQQWKMSTA 204
            ..|.|:..     ..:...|.|.|:|....:.|:..|:                ||..:..:.:.
plant   167 ELRERVAS-----GVDPNKLYEKQEENTVPSDDQDMDQ----------------PSHDEENIPSK 210

  Fly   205 SSNSTLATPSFSRGNAVMSTPYSGVNATFDRSGASVAPAFDRNGAPLASMDISDYGQPLPPSQPP 269
            |.::.....:|..         |.:|..||  .||..|:.::|         .|....|...|..
plant   211 SVDADTNADAFED---------SMLNEIFD--NASKLPSDEQN---------MDKSSELTEEQRA 255

  Fly   270 TPAAKKL---------SNEQMARIAENRRLAQERLKAKQQ 300
            ...|.:|         |.||..|:..||..|.||.||:.|
plant   256 RMEANRLKAMEKAQNISEEQRVRMEANRLKALERAKARLQ 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10336NP_609895.2 Swi3 66..148 CDD:462324 23/84 (27%)
AT3G02820NP_001327085.1 PTZ00368 11..>46 CDD:173561
zf-CCHC 24..40 CDD:395050
Swi3 90..172 CDD:462324 22/81 (27%)
Blue background indicates that the domain is not in the aligned region.

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