DRSC/TRiP Functional Genomics Resources

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Protein Alignment msl-1 and Msl1

DIOPT Version :9

Sequence 1:NP_001286054.1 Gene:msl-1 / 35121 FlyBaseID:FBgn0005617 Length:1039 Species:Drosophila melanogaster
Sequence 2:XP_006247366.1 Gene:Msl1 / 303514 RGDID:1564778 Length:615 Species:Rattus norvegicus


Alignment Length:477 Identity:101/477 - (21%)
Similarity:172/477 - (36%) Gaps:145/477 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   542 QLDVRVEPQEDVRKVQK--ETLKRQPEDAPKHLPKAVAPKVTKTSSRESTLPKANTADIKDAPAQ 604
            |||:..:.|:.::..:|  |.||.:.:        .:..::.:...|...:.:.|     :....
  Rat   230 QLDLIEQQQQQLQAKEKEIEELKSERD--------TLLARIERMERRMQLVKRDN-----EKERH 281

  Fly   605 KVIANHQSTKTQTDPVKTQRLQVKIRQYEMHPDM-RTGSSAPS-------DIRKQKNVDPVSTPE 661
            |:...::..:.:    :|: |..||: .|..|:: .|..:.||       ..:..|...|....|
  Rat   282 KLFQGYEPEERE----ETE-LSEKIK-LERQPELCETSQALPSKPFSCGRSGKGHKRKTPFGNTE 340

  Fly   662 TKTIKSKSMLVNDKKTTSETSQSPDQEIDVETVRRKLAEHLKKELLSQSHSSQVTLKKIRERVAT 726
            .||...|......|..|.....||.:|....::...:.   |:||.||.     |.:|.|..|.|
  Rat   341 RKTPVKKLAPEFSKFKTKTPKHSPIKEEPCGSISETVC---KRELRSQE-----TPEKPRSSVDT 397

  Fly   727 NLIYPPPSAPVSSTTITPAPTPSTTPTPGSTPQHAVTSSMD--------------------QEIS 771
                 ||...      ||...|||.|     .:.|.:|.|:                    ..:.
  Rat   398 -----PPRLS------TPQKGPSTHP-----KEQAFSSEMEDLPYLSTTEMYLCRWHQPPPSPLP 446

  Fly   772 AAKSKSKAAEQIATPLTPQSNSSVSSTTSTIRKTLNNCSPHTYSKATARSGKLQSRFRTATFPYS 836
            ..:|..|..|.:|..|.|   |||:..||.                                   
  Rat   447 LRESSPKKEETVARCLMP---SSVAGETSV----------------------------------- 473

  Fly   837 TRTWEDQEFHCDNEFFLEEADELLADNPSLEIPKWRDVPVPPSSDKIDTEL---LSDATFERRHQ 898
                                         |.:|.|||..|.|..|...:::   |.|:.|.:||.
  Rat   474 -----------------------------LAVPSWRDHSVEPLRDPNPSDILENLDDSVFSKRHA 509

  Fly   899 KYVKDEVDRKCRDARYMKEQIRLEQLRMRRNQDEVLVALDPLRASTFYPLPEDIEAIQFVNEVTV 963
            |...||..||..|.:.::||..|::|::|..:.:.:...:| ..::|:|.|:|:|::.....:.|
  Rat   510 KLELDEKRRKRWDIQRIREQRILQRLQLRMYKKKGIQESEP-EVTSFFPEPDDVESLMITPFLPV 573

  Fly   964 QAFGENVVNMEARDDFGVPWVD 985
            .|||..:..:..: :|.:||:|
  Rat   574 VAFGRPLPKLTPQ-NFELPWLD 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
msl-1NP_001286054.1 PEHE 867..983 CDD:291924 34/118 (29%)
Msl1XP_006247366.1 PEHE 476..592 CDD:291924 34/117 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338551
Domainoid 1 1.000 60 1.000 Domainoid score I10350
eggNOG 1 0.900 - - E1_2CMD8
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 107 1.000 Inparanoid score I4831
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto95442
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR21656
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.980

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