DRSC/TRiP Functional Genomics Resources

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Protein Alignment msl-1 and msl1a

DIOPT Version :9

Sequence 1:NP_001286054.1 Gene:msl-1 / 35121 FlyBaseID:FBgn0005617 Length:1039 Species:Drosophila melanogaster
Sequence 2:NP_001107940.1 Gene:msl1a / 100000715 ZFINID:ZDB-GENE-030131-8168 Length:489 Species:Danio rerio


Alignment Length:488 Identity:112/488 - (22%)
Similarity:179/488 - (36%) Gaps:137/488 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   606 VIANHQSTKTQTDPVKTQRLQVKIRQYEMHPDMRTGSSAPSDIRKQKNVDP---VSTPETK---- 663
            :|..||         ...:.::..|:....||..:....     ..||.:|   :..|.||    
Zfish    52 IIQKHQ---------VQSKAKISCRKVLSCPDQSSAGGL-----GHKNWEPSGALILPSTKQMGA 102

  Fly   664 ---TIKSKS---------------MLVNDKKTTSETSQ--------SPDQE-------------- 688
               .:||:|               |:.||.....|..|        ||:..              
Zfish   103 EGSPVKSRSLFCQTNHNHLVNMDPMVSNDNNQQREGEQVGAMVGDSSPEDSPSGKHWNVRKGSGL 167

  Fly   689 IDVET--VRRKLAEHLKKELLSQS----HSSQVTLKKIR----------ERVATNLIYPPPSAPV 737
            :|.:|  :|:.|.  |:.||:.|.    |:....::.::          ||:...|........|
Zfish   168 VDPQTSCIRQILL--LQLELIEQQQKHLHNKNKEIEDLKAEKEMLMARIERMEHRLQMVKKDGVV 230

  Fly   738 SSTTITPAPTPSTTPTPGSTPQHAVTSSMDQEISAAKSKSKAAEQIATPLTPQSNSSVSSTTSTI 802
            |        .||.| |....|:...|:|.|.:.|..:        :.||...|....|..:..  
Zfish   231 S--------RPSQT-TCHKEPEAETTTSDDVQHSGGR--------VQTPKQTQRGRGVKGSKG-- 276

  Fly   803 RKTLNNCSPHTYSKATARSGKLQSRFRTATFPYSTRTWEDQEFHCDNEFFLEEADELLAD----- 862
             |.|...||      |.||.:.|.|....:...|....||.:.|.....:|...:..|:.     
Zfish   277 -KFLLQDSP------TGRSRRGQPRSPPTSQQESPALKEDMQCHSKEVPYLTTTEMYLSHWQTPP 334

  Fly   863 ----NPS------LEIPKWRDVPVPPSSDKIDT---ELLSDATFERRHQKYVKDEVDRKCRDARY 914
                :||      :|:|.||:..:.|...|..:   |.|.|:.|.:||.|...||..||..|.:.
Zfish   335 SPQRDPSTVHENTVEVPSWRESILEPLGQKEASDILECLDDSVFLKRHSKLELDEKRRKRWDIQR 399

  Fly   915 MKEQIRLEQLRMRRNQDEVLVALDPLRASTFYPLPEDIEAIQFVNEVTVQAFGENVVNMEARDDF 979
            ::||...::|:.|.|:.:|:...:| ...:|:..|||:|.|.....:.|.|||..:.|:: :.||
Zfish   400 IREQRMFQRLQQRMNRRKVIQESEP-ELLSFHAEPEDVEYIMVTPFLPVVAFGSPLPNLK-QQDF 462

  Fly   980 GVPWVDAIEAPTSIARSKALAEPVATLASKKIP 1012
            .:||:|        .||:...|    :..|:.|
Zfish   463 DLPWLD--------ERSRCQPE----VTKKRTP 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
msl-1NP_001286054.1 PEHE 867..983 CDD:291924 38/118 (32%)
msl1aNP_001107940.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 126..164 7/37 (19%)
MSL1_dimer 168..203 CDD:293406 9/36 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 224..311 27/112 (24%)
PEHE 349..466 CDD:291924 38/118 (32%)
Bipartite nuclear localization signal. /evidence=ECO:0000250|UniProtKB:Q6PDM1 380..394 6/13 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578064
Domainoid 1 1.000 61 1.000 Domainoid score I10457
eggNOG 1 0.900 - - E1_2CMD8
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto40682
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21656
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.930

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