DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tos and Ercc5

DIOPT Version :10

Sequence 1:NP_477145.1 Gene:tos / 35119 FlyBaseID:FBgn0015553 Length:732 Species:Drosophila melanogaster
Sequence 2:NP_001413927.1 Gene:Ercc5 / 301382 RGDID:1586176 Length:1168 Species:Rattus norvegicus


Alignment Length:504 Identity:105/504 - (20%)
Similarity:185/504 - (36%) Gaps:147/504 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 LPAKALTEKRRRDSRKQSKERAAELLRLGRIEEARSHMRRCVDVTHDMALRLIRECRSRNVDCIV 146
            |.:..|.|:...:::||.::|.|                  ..||..|.|......|...:..|.
  Rat   736 LESNLLAEQNSLEAQKQQQDRIA------------------ASVTGQMFLESQELLRLFGIPYIQ 782

  Fly   147 APYEADAQMAWLNRADVAQYIITEDSDLTLFGAKNIIFKLDLNGSGLLVEAEKLHLAMGCTEEKY 211
            ||.||:||.|.|:..|.....||:|||:.||||:: ::|...|.:..:              |.|
  Rat   783 APMEAEAQCAILDLTDQTSGTITDDSDIWLFGARH-VYKNFFNKNKFV--------------EYY 832

  Fly   212 HF-----------DKFRRMCILSGCDYLDSLPGIGLAKACKF-----------ILK------TEQ 248
            .:           :|...:..|.|.||.:.:|.:|...|.:.           :||      ..|
  Rat   833 QYVDFYNQLGLDRNKLINLAYLLGSDYTEGIPTVGCVTAMEILNEFPGRGLDPLLKFSEWWHKAQ 897

  Fly   249 EDMRIA-----------LKKIPSYLNMRNLEVDDDYIENFMKAEATFRHMFIY-NPLERRMQRLC 301
            .:.:.|           |:|:.......|..|.|.|:...:...   |..|:: .|...:::..|
  Rat   898 NNKKAAENPYDTKVKKKLRKLQLTPGFPNPAVADAYLRPVVDDS---RGSFLWGKPDVDKIREFC 959

  Fly   302 ALEDYETDERYCSNAGTLLEDSEQALHLALGNLNPFSMK-RLDSW--TPEKAWPTPKNVKRSKHK 363
                    :||   .|.....::::|:..|..||....: |:||:  ..::.....|::|     
  Rat   960 --------QRY---FGWNRMKTDESLYPVLKQLNAHQTQLRIDSFFRLAQQEKQDAKHIK----- 1008

  Fly   364 SIWQTNFQSENTHTPKKENPCALFFKKVDFVGKTLNEEIEANQRLEQAKQTEAELFNMYSFKAKR 428
                       :|...:...|.|..::.:..|:           |::..:|    .:..:.|.::
  Rat  1009 -----------SHRLSRAVTCMLRKEREETAGE-----------LKKVPET----LDKANGKTQK 1047

  Fly   429 RRSP-SREDSVDQERTPPPSP--VHKSRHNPFAKERTGEE--------ANQRSPVVCENAS---- 478
            |..| :||.||.:.|.|..:.  :..|..:...:|.:.||        |.||......|.|    
  Rat  1048 RSQPNTRETSVPKRRRPSGNGGFLGNSYLSELPQESSSEEAEGSSMISAQQRRAAESSNVSCSDL 1112

  Fly   479 --LLR--------LLSPKKASPLDGEAGVKKVDSLKRSIFAKEQVQIRS 517
              |:|        .:|...:|. |||...|.|....|.:|.|::.::::
  Rat  1113 PDLVRDTPHGRDGYMSTSSSSE-DGEDKAKAVLVTARPVFGKKKGKLKN 1160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tosNP_477145.1 PIN_EXO1 1..202 CDD:350207 33/119 (28%)
H3TH_EXO1 214..291 CDD:188628 20/105 (19%)
Ercc5NP_001413927.1 None

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