DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tos and exo1

DIOPT Version :9

Sequence 1:NP_477145.1 Gene:tos / 35119 FlyBaseID:FBgn0015553 Length:732 Species:Drosophila melanogaster
Sequence 2:NP_596050.1 Gene:exo1 / 2540348 PomBaseID:SPBC29A10.05 Length:571 Species:Schizosaccharomyces pombe


Alignment Length:530 Identity:156/530 - (29%)
Similarity:251/530 - (47%) Gaps:64/530 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGITGLIPFVGKASSQLHLKDIRGSTVAVDTYCWLHKGVFGCAEKLARGEDTDVYIQYCLKYVNM 65
            |||.||:..:.......|:::..|.|:.||.|.||||.||.||.:||..::||.|::|.:....|
pombe     1 MGIKGLLGLLKPMQKSSHVEEFSGKTLGVDGYVWLHKAVFTCAHELAFNKETDKYLKYAIHQALM 65

  Fly    66 LLSYDIKPILVFDGQHLPAKALTEKRRRDSRKQSKERAAELLRLGRIEEARSHMRRCVDVTHDMA 130
            |..|.:||::||||..||.||.||::|::.|:::.|...:|...|:..:|.....||||||.:||
pombe    66 LQYYGVKPLIVFDGGPLPCKASTEQKRKERRQEAFELGKKLWDEGKKSQAIMQFSRCVDVTPEMA 130

  Fly   131 LRLIRECRSRNVDCIVAPYEADAQMAWLNRADVAQYIITEDSDLTLFGAKNIIFKLDLNGSGL-- 193
            .:||...|...::.||||||||||:.:|.:.::...|||||||:.:|||:.::||:|..|:.:  
pombe   131 WKLIIALREHGIESIVAPYEADAQLVYLEKENIIDGIITEDSDMLVFGAQTVLFKMDGFGNCITI 195

  Fly   194 ----LVEAEKLHLAMGCTEEKYHFDKFRRMCILSGCDYLDSLPGIGLAKACKFILKTEQEDMRIA 254
                :..|:.|:|       :...:|.|.|.|.|||||.|.:.|:||..|.:::.|..:....|.
pombe   196 RRNDIANAQDLNL-------RLPIEKLRHMAIFSGCDYTDGVAGMGLKTALRYLQKYPEPRAAIR 253

  Fly   255 LKKIPSYLNMRNLEVDDDYIENFMKAEATFRHMFIYNPLERRMQRLCALEDYETDERYCSNAGTL 319
            ..::.     ::|:|...:.:.|..|:..|||..:|.|.::.:..|...| .|......:..|:.
pombe   254 AMRLD-----KSLKVPVSFEKEFALADLAFRHQRVYCPKDKTLVHLSPPE-RELSVHEDAFIGSF 312

  Fly   320 LEDSEQALHLALGNLNPFSMKRLDSWTPEKAWPTPKNVKRSKHKSIWQT---NFQSENTHTPKKE 381
            . |::.|:.:|.|..||.:....|.........|...:..||.|.|.:|   ||..::  .|..:
pombe   313 F-DNQLAIDIAEGRSNPITKCAFDIKDSSMQSFTKTTITISKRKGISKTDISNFFMKS--IPPSK 374

  Fly   382 NPCALFFKKVDFVGKTLNEEIEANQRLEQAKQTEAELFNMYSFKAKRRRSP---SREDSVDQERT 443
            .|.    |....:..| |.::   ||...|....:|..::.|...|...:|   |.:....:..:
pombe   375 RPT----KSTSLIDVT-NVKV---QRTHLANDISSEKQSIKSANEKAYVTPKSNSLKPGFGKSLS 431

  Fly   444 PPPSPVHKSRHNPFAKERTG------------EEANQRSPVVCENA----------------SLL 480
            ...:...|:.:.||...|||            :|.:::.|....|.                |..
pombe   432 DISNSATKNENVPFLPPRTGVSKYFKLQKNTEKEIDEQVPSQSNNTTPTSAKSDSASPQNWFSSF 496

  Fly   481 RLLSPKKASP 490
            ...:|..|||
pombe   497 SYQTPNSASP 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tosNP_477145.1 PIN_EXO1 1..204 CDD:189027 85/208 (41%)
H3TH_EXO1 214..291 CDD:188628 23/76 (30%)
exo1NP_596050.1 PIN_EXO1 1..206 CDD:189027 83/204 (41%)
Exo 14..314 CDD:223336 109/313 (35%)
H3TH_EXO1 213..285 CDD:188628 23/76 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 94 1.000 Domainoid score I1963
eggNOG 1 0.900 - - E1_COG0258
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 215 1.000 Inparanoid score I931
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003113
OrthoInspector 1 1.000 - - oto102036
orthoMCL 1 0.900 - - OOG6_101671
Panther 1 1.100 - - LDO PTHR11081
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R423
SonicParanoid 1 1.000 - - X2084
TreeFam 1 0.960 - -
1211.850

Return to query results.
Submit another query.