DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tos and crn-1

DIOPT Version :9

Sequence 1:NP_477145.1 Gene:tos / 35119 FlyBaseID:FBgn0015553 Length:732 Species:Drosophila melanogaster
Sequence 2:NP_491168.1 Gene:crn-1 / 171917 WormBaseID:WBGene00000794 Length:382 Species:Caenorhabditis elegans


Alignment Length:395 Identity:96/395 - (24%)
Similarity:172/395 - (43%) Gaps:57/395 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGITGLIPFVG-KASSQLHLKDIR---GSTVAVDTYCWLHKGVFGCAE--KLARGED--TDVYIQ 57
            |||.||...:. .|.|.:.:.:::   |.|||:|....|::.:....:  ...:.||  |..::.
 Worm     1 MGIKGLSQVIADNAPSAIKVNEMKAFFGRTVAIDASMCLYQFLIAVRQDGSQLQSEDGETTSHLM 65

  Fly    58 YCLKYVNMLLSYDIKPILVFDGQHLPAKALTEKRRRDSRKQSKERAAELLRLGRIEEARSHMRRC 122
            ..|.....:....:||:.||||:....|....::|.:.|.::::...|....|.::||....||.
 Worm    66 GMLNRTVRMFENGVKPVYVFDGKPPDMKGGELEKRSERRAEAEKALTEAKEKGDVKEAEKFERRL 130

  Fly   123 VDVT---HDMALRLIRECRSRNVDCIVAPYEADAQMAWLNRADVAQYIITEDSDLTLFGAKNIIF 184
            |.||   :|.|.||:   ....:..:.||.||:||.|.|.:|......:|||.|...||: .::.
 Worm   131 VKVTKQQNDEAKRLL---GLMGIPVVEAPCEAEAQCAHLVKAGKVFGTVTEDMDALTFGS-TVLL 191

  Fly   185 KLDLNGSGLLVEAEKLHLAMGCTEEKYHFDKFRRMCILSGCDYLDSLPGIGLAKACKFILKTEQE 249
            :..|......:..::.:|::...|.|...::|..:|||.||||..::.|:|..||.:.|  .:.:
 Worm   192 RHFLAPVAKKIPIKEFNLSLALEEMKLSVEEFIDLCILLGCDYCGTIRGVGPKKAVELI--RQHK 254

  Fly   250 DMRIALKKIPS----------YLNMRNLEVDDDYIENFMKAEATFRHMFIYNPLERRMQRLCALE 304
            ::...|:.|..          |...|.|.::.: :....:.|.|::..    .:|..:|.||..:
 Worm   255 NIETILENIDQNKYPPPEDWPYKRARELFLNPE-VTKPEEVELTWKEA----DVEGVIQFLCGEK 314

  Fly   305 DYETDERYCSNAGTLLEDSEQALHLALGNLNPFSMKRLDSW-------------TPEKAWPTPKN 356
            ::  :|....||...|:.|.::          .:..|:||:             |..||....|.
 Worm   315 NF--NEERIRNALAKLKTSRKS----------GTQGRIDSFFGNSTKVTCVTAATKRKAEEAEKA 367

  Fly   357 VKRSK 361
            .|.:|
 Worm   368 KKGAK 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tosNP_477145.1 PIN_EXO1 1..204 CDD:189027 56/213 (26%)
H3TH_EXO1 214..291 CDD:188628 20/86 (23%)
crn-1NP_491168.1 PIN_FEN1 4..344 CDD:189037 87/362 (24%)
fen_arch 22..344 CDD:274717 83/344 (24%)
H3TH_FEN1-Euk 221..290 CDD:188627 18/71 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0258
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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