DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tos and ercc5

DIOPT Version :9

Sequence 1:NP_477145.1 Gene:tos / 35119 FlyBaseID:FBgn0015553 Length:732 Species:Drosophila melanogaster
Sequence 2:XP_012811722.1 Gene:ercc5 / 100124735 XenbaseID:XB-GENE-960380 Length:1251 Species:Xenopus tropicalis


Alignment Length:797 Identity:146/797 - (18%)
Similarity:272/797 - (34%) Gaps:276/797 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGITGLIPFVGKASSQLHLKDIRGSTVAVDTYCWLHKGVFGCAEK----LARGEDTDVYIQYCLK 61
            ||:.||...:......::.:.:.|..:|:|...||::.|.|..::    :.......::.:.|  
 Frog     1 MGVQGLWKLLECTGRPINAETLEGKILAIDISIWLNQAVKGARDRQGNAIQNAHLLTLFHRLC-- 63

  Fly    62 YVNMLLSYDIKPILVFDGQHLPAKALTEKRRRDSRKQSKERAAELLRLGRIEEARSHMRRCVDVT 126
               .||.:.|:||.||||:    ..|.:::....|:|.|:.|:        .||:.        |
 Frog    64 ---KLLFFRIRPIFVFDGE----APLLKRQTLAKRRQRKDNAS--------NEAKK--------T 105

  Fly   127 HDMALRLIRECRSRNVDCIVAPYEADAQMAWLNRADVAQYIITEDSDLTLFGAKNIIFKLDLNGS 191
            |:..||                       .:|.|..:                     |..|:|:
 Frog   106 HEKLLR-----------------------TFLKRQAI---------------------KAALSGN 126

  Fly   192 GLLVEAEKLHLAMGCTEEKYHFDKFRRMCILSGCDYLDSLPGIGLAKACKFILKTEQEDMRIALK 256
                                                                  .:..|      
 Frog   127 ------------------------------------------------------KQSND------ 131

  Fly   257 KIPSYLNMRNLEVDDDYI-------ENFMKAEATFRHMFIYNPLERRM---QRLCALEDYETDER 311
            ::||:..:|..|.||.||       |.:...|...|      ..|.||   |||        .|.
 Frog   132 ELPSFSKVRRKETDDLYILPPLEDNEKYSSEEEEER------AWEERMTQKQRL--------QEE 182

  Fly   312 YCSNAGTLLEDSEQAL-------HLALGNLNPFSMKRLDSWTPEKAWPTPKNVKRSKHKSIWQTN 369
            :.:|..::..:||:.:       |..|.::..|:.:|.   |..:|.|...|            :
 Frog   183 FFANPSSVDIESEEFISLPPEVKHEILTDMKEFTKRRR---TLFEAMPEDSN------------D 232

  Fly   370 F-QSENTHTPKKENPCALFFKKVDFVGKTLNE----EIEANQRLEQA--KQTEAELF----NMYS 423
            | |.:.:...||.|    ..|.:|.|.|.||:    |::|....|..  |:.|....    |.:.
 Frog   233 FSQYQLSGLLKKNN----LNKCIDNVRKELNQQYSGEVQAQFEAEGGFLKEVETRRLVSEDNSHY 293

  Fly   424 FKAKRRRSPSREDSVDQERTPPPSPVHKSRHNPFAKERTGEEANQRSPVVCENASLLRLLSPKKA 488
            ...|..:|...|..||   :||.|..:.|...|    :|..:              |:|.|.:||
 Frog   294 ILIKGIQSKKEEKKVD---SPPQSVTYNSSQTP----KTYLD--------------LKLASARKA 337

  Fly   489 SPLDGEAGVKKVDSLKRSIFAKEQVQIRSRFFATQDEQTRLQREHLRDTENDDMDEQKLSSHSGH 553
            ..             .::..|.|:.......||.|:..|    |::.|   ::.|::|      |
 Frog   338 KS-------------SQAASADEEPPSPRTLFAIQEAMT----ENILD---ENWDDEK------H 376

  Fly   554 KKLRLVCKDIPGKNPIR--QRCSSQISDGETDTDTTASSLLESQDKG------VPSPLESQEDLN 610
            :|..:..::..|....|  |.....:::.|........::::|:.:.      |.|..:.:::..
 Frog   377 EKPSVSVREAEGNVSPRTLQAIYQVLAEDEAGQSNKKKTVVQSEREHKKAKVIVISSSDEEDNCL 441

  Fly   611 NSQPQ------IPTEGNTNSTTIRIK--SLDLLLE--NSPEPTQESDRNNNDAIILLSDDSCSSD 665
            |:|.:      :|.....:.::::.:  ::..:|:  :|...:|..:.:|...::.::|.:...|
 Frog   442 NNQGRTKAAFGVPLINRVSPSSVQCQESAVSSVLDCAHSRSVSQVEEPSNEVNVVEMADHNLQLD 506

  Fly   666 QR----ASST---SSSSQQRQ------NFLPTSKRRVGLSKPSTAKKGTPKSRTNGKLGAVSQN- 716
            .|    |..|   |||:...:      |.:|.:.....||...:.:|.......:|...: |:: 
 Frog   507 NRNVPIAQDTLIVSSSTGNAENPVTLCNTIPVTSEIPLLSVNRSIQKSVINPYNSGSFDS-SRDI 570

  Fly   717 --QTKLSMFGFQTKPVL 731
              |...:..||...||:
 Frog   571 SLQGDANKQGFSDNPVV 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tosNP_477145.1 PIN_EXO1 1..204 CDD:189027 37/206 (18%)
H3TH_EXO1 214..291 CDD:188628 12/83 (14%)
ercc5XP_012811722.1 rad2 1..1112 CDD:273166 146/797 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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