DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43338 and Tex21

DIOPT Version :9

Sequence 1:NP_001246080.1 Gene:CG43338 / 35117 FlyBaseID:FBgn0263079 Length:853 Species:Drosophila melanogaster
Sequence 2:NP_062758.3 Gene:Tex21 / 80384 MGIID:1931131 Length:575 Species:Mus musculus


Alignment Length:739 Identity:130/739 - (17%)
Similarity:248/739 - (33%) Gaps:261/739 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 GELA--EARAALCSKDADIENLRAQAARQTALIGSLQSRLQNSESREQAVQARCDSTIQTVQREK 155
            |.||  :.:.|..:|..:..:|...:||:...:......|:            .|.|...:...|
Mouse    14 GRLANSQTKEACEAKPPEARHLSHLSARENVPVACFDPPLE------------MDPTGNPIIHNK 66

  Fly   156 RSSDE----------RNKELICKIQHLETHMASEESQKEQIKAQLHDLLRRLSITLGMDVCDGNQ 210
            :::|.          :||.|:.::::|::.:..:|:..:::||:|.....|              
Mouse    67 KAADPVHPDLASMLVKNKTLLAELRNLQSKLYVKETSLQEVKAELESYKER-------------- 117

  Fly   211 NSHATPECIISRAEEVMVELQRTKAKVSSTCDTLSSCE---NELLNLKSLANIEKQRLTAQLDGA 272
                       .|::   |||     :.|..|.:.|.:   :.|:.:|.|.|...|..       
Mouse   118 -----------NAQQ---ELQ-----IISLRDDIKSLQDLIDSLMKMKILKNTNSQNF------- 156

  Fly   273 GNHNHELEGRCRQYERDLQIQRDRLTESEINGEKLKEELRGFESRCHRL----------QNNLD- 326
            |.||.:|.      ||.|.:: :||.|..:..|::|.||......|...          :::|| 
Mouse   157 GRHNWDLT------ERVLDLE-NRLREHLVGREEIKAELLEKRRSCPSSFSPYMNLKGPEDSLDI 214

  Fly   327 --------------------------RTQGDRLQFLRGL-------SNLLNVPEPC--------- 349
                                      :|.||:.|  :.|       |.|...|..|         
Mouse   215 FPVKDNDEVYNLKRGSVVYSEGPIDGQTTGDKCQ--QDLIHQEKLTSELDRAPFSCGWETTPEQS 277

  Fly   350 ---------ETLIKDKLREILAENQAMHAQMHSLRDQLNSEHEKLKETQQTTECRLRSGEAQKCE 405
                     .||:.|.:..|||..:|:..::           :::...:|:.:|:..:.:.:...
Mouse   278 HHQDFLGQLATLLSDSIGPILATEEAVKERI-----------QEMGANEQSWKCKAEALQQEIQT 331

  Fly   406 LTERLEKCHAEIHTLRKDHMGLSEFLQRLALAMNWGECSAPPALGTDTNLMAENLLERAERLAAH 470
            ||:|||:.:                                            .|.|.|:....:
Mouse   332 LTKRLEQLY--------------------------------------------RLYEEAQTEENY 352

  Fly   471 CDHEAPHHHHHHHSPDKGCCDHGHGHGKLRRERSCHDIPLKESSSVYNLQ--RRVRVLREQVQRR 533
            .:.|.|               .|...||           :..|.|:.||.  |:....|.:....
Mouse   353 TEQERP---------------LGPLEGK-----------VAVSCSLRNLDVGRKKENSRTRTAHI 391

  Fly   534 DLHLELLRRKLAIIEDGARGKCMLQGERDEAVCRAKKAAKQVDKLSAQLADARSQIAEVKAQLAE 598
            |.|.:.  :||         :.:|..|::..:..|.:..:::.:|..||:|.:.....:|.||..
Mouse   392 DKHSKF--KKL---------EMLLDIEQNSKMAAAPRMEEKIQRLQKQLSDLKLSNKNMKTQLTR 445

  Fly   599 AVEYKITSLERARKIDELTTQICDLEDEKTRLLSQLNALKERLKSSCESNQNRRCRDEALINSMR 663
            ....|..::||.|   :..|::..|:::.......|....:..:......:.|..:..|   ...
Mouse   446 INVLKDKTIERLR---QSVTKVETLKEKTAAKTDNLKTPSDPAEQGARPEKERAHQTPA---QSL 504

  Fly   664 DDVSRLSSQLSDANQRLSHLQSFRTSVARTLHLR-DLPETDLLHRLQALCSAHQEFTMLSKRYET 727
            .|.|.:.:.|...:.|...|..||.::.:.|... ...:.|:::||:.:...::    :|||.:.
Mouse   505 PDPSTVRAVLKGLSGREQELADFREAIMKMLGFNMKTADKDVINRLKLVVQIYE----ISKRSKM 565

  Fly   728 ASPVGDHPCPRFDDPIPPSSHCRP 751
            |                  |||.|
Mouse   566 A------------------SHCEP 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43338NP_001246080.1 SMC_prok_B <77..412 CDD:274008 73/395 (18%)
SMC_prok_A 305..>644 CDD:274009 65/402 (16%)
Tex21NP_062758.3 Smc <88..480 CDD:224117 93/535 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834091
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18863
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.990

Return to query results.
Submit another query.