DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43338 and ccdc170

DIOPT Version :9

Sequence 1:NP_001246080.1 Gene:CG43338 / 35117 FlyBaseID:FBgn0263079 Length:853 Species:Drosophila melanogaster
Sequence 2:XP_003200359.3 Gene:ccdc170 / 791129 ZFINID:ZDB-GENE-070112-162 Length:693 Species:Danio rerio


Alignment Length:780 Identity:197/780 - (25%)
Similarity:332/780 - (42%) Gaps:177/780 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 TVTEHH--HGLDLTTTLRSELAALSYKKERLTGELAEARAALCS--------KDADIENLRAQAA 117
            :|.:.|  |....|.|.|.|||||..|...|..:|:|:::.:.|        ||| ::..:.:.|
Zfish     5 SVIQQHLSHYKQATETAREELAALQAKHNSLQTQLSESQSRVVSQEETLRSLKDA-VDRYKEKEA 68

  Fly   118 RQTALIGSLQSRLQNSESREQAV---QARCDSTIQTVQREKRSSDERNKELICKIQHLET----- 174
            ||.:|||||:.|..|:|....::   ::..|..|||:.:|       |:|:..||..||.     
Zfish    69 RQESLIGSLRERNYNTEQEMISITSTRSIMDIRIQTLTKE-------NQEIKEKIMQLEVESKQY 126

  Fly   175 ----HMASEESQKEQIKAQ--LHDLLRRLS-ITLG-----------MDVC--DGNQNSHAT---- 215
                :.|.:|:.:.|.|.:  :..|..::| |..|           :|.|  |..:..:..    
Zfish   127 VAECNKAKQEAAEAQRKCEEFISTLANKISVIATGKADPMDYIVSVVDACFKDRERLKNCVCALE 191

  Fly   216 -------PECIISR--AEEVMVELQRTKAKVSSTCDTLSSCENELLNLKSLANI----EKQRLTA 267
                   .||..||  .:.:..::.|.:...:|..:.|:|...| |:|.||..:    |.|....
Zfish   192 ESVKLYEVECKASRETVKRLATDVDREQTLSASRANELNSSRQE-LDLISLRKVSLERENQSAKV 255

  Fly   268 QLDGAGNHNHELEGRCRQYERDLQIQRDRLTESEINGEKLKEELRGFESRCHRLQNNLD------ 326
            .|..|.......:..||.||   .:.:|...:.:|:..:.|...|...:...:::..||      
Zfish   256 SLQEAEAALASAQQLCRHYE---NLSQDLQNKLQISQNEAKASHRHHGAFMKKVETLLDDHSLPG 317

  Fly   327 -RTQGDRLQFLRGLSNLLNVPEPCETLIKDKLREILAENQAMHAQMH--SLRDQLNSEHEKLKET 388
             .|:.|.|..|..|         |:       ||..|:...|..::.  .:.:||:|    :||.
Zfish   318 QHTEQDMLSALTDL---------CK-------RETSAQKSQMEMEVRLAEMVEQLSS----IKEH 362

  Fly   389 QQTTECRLRSGEAQKCELTERLEKCHAEIHTLR--KDHMGLSE-----FLQRLALAMNWGECSAP 446
            |.|:       |.:|.||.:|::....|:...|  ||.|...:     |:::|:..:...:.:| 
Zfish   363 QNTS-------EQKKQELLDRIQSLEDELINARVCKDGMNQDKQQYLRFVEQLSEMLKVDDVAA- 419

  Fly   447 PALGTDTNLMAENLLERAERLAAHCDHEAPHHHHHHHSPDKGCCDHGHGHGKLRRERSCHDIPLK 511
             .||.|..|  |.:|.||::|:.|                :|..                  .|:
Zfish   420 -ELGFDMRL--EVILTRAQQLSRH----------------EGTA------------------LLE 447

  Fly   512 ESSSVYNLQRRVRVLREQVQRRDLHLELLRRKLAIIEDGARGKCMLQGERDEAVCRAKKAAKQVD 576
            ..:..|:|||:::..:.:.:.:||:|||||||:..:|:..|.:..|..|:|:|....||..|:||
Zfish   448 TKTQTYSLQRKLKEQKSRSESKDLYLELLRRKVQQLEEEKRSRSTLALEKDDAALSCKKLQKRVD 512

  Fly   577 KLSAQLADARSQIAEVKAQLAEAVEYKITSLERARKIDELTTQICDLEDEKTRLLSQLNALKERL 641
            :|.|:|:..|....|:||||:...:.:||.:|:.:.|:|....:..||.:|.:...:|.::...|
Zfish   513 RLQAELSTLRFSNTELKAQLSHTNQLQITVMEQKQTIEEQNKNLGKLEKKKVKTEQKLTSVTSEL 577

  Fly   642 KSSCESNQNRRCRDEALINSMRDDVSRLSSQLSDANQRLSHLQSFRTSVARTLHLR---DLPETD 703
            ||     |..:.|||  |......:...||.::|.......|..|.|.|::.|.:.   .:|..:
Zfish   578 KS-----QELKARDE--IQQAHRLLDTQSSAIADLTHTEKQLLDFYTVVSQMLGVHCTGCIPNYE 635

  Fly   704 LLHRLQALCSAHQEFTMLSKRYETASPVGDHPCPRFDDPIP----PSSHCRPPREL---SPPPTS 761
            :|.||:.|..:.|       .:.||..   |.|  ::.|:.    ..||...|:.|   |.|..|
Zfish   636 VLRRLEVLIQSRQ-------CHSTAHL---HTC--WNSPVSSINVDQSHEFKPQALPAASSPTAS 688

  Fly   762  761
            Zfish   689  688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43338NP_001246080.1 SMC_prok_B <77..412 CDD:274008 96/396 (24%)
SMC_prok_A 305..>644 CDD:274009 90/354 (25%)
ccdc170XP_003200359.3 Smc <7..387 CDD:224117 101/418 (24%)
Smc <344..>605 CDD:224117 84/316 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576788
Domainoid 1 1.000 141 1.000 Domainoid score I4646
eggNOG 1 0.900 - - E1_28JEG
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H69393
Inparanoid 1 1.050 142 1.000 Inparanoid score I4458
OMA 1 1.010 - - QHG50021
OrthoDB 1 1.010 - - D178699at33208
OrthoFinder 1 1.000 - - FOG0007014
OrthoInspector 1 1.000 - - oto41722
orthoMCL 1 0.900 - - OOG6_108155
Panther 1 1.100 - - LDO PTHR18863
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R7288
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1514.840

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