DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43338 and Ccdc170

DIOPT Version :9

Sequence 1:NP_001246080.1 Gene:CG43338 / 35117 FlyBaseID:FBgn0263079 Length:853 Species:Drosophila melanogaster
Sequence 2:NP_001357921.1 Gene:Ccdc170 / 100504234 MGIID:2685067 Length:722 Species:Mus musculus


Alignment Length:756 Identity:178/756 - (23%)
Similarity:331/756 - (43%) Gaps:150/756 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 HHGLDLTTTLRSELAALSYKKERLTGELAEARAALCSKDA-------DIENLRAQAARQTALIGS 125
            :|..::|..::|||||:..|.|....||.|.|:.:.||:|       ::|:.:..:||::||:.|
Mouse    39 NHYRNVTENVQSELAAMLVKFECAQSELRELRSKMLSKEACCQELKVEMESYKESSARKSALLTS 103

  Fly   126 LQSRLQNSESREQAVQA---RCDSTIQTVQREKRSSDERNKELICKIQHLETHM-----ASEESQ 182
            |:.|::..:....||.|   |.::::..:.:|       |:||:.|:..|:..:     .:|||:
Mouse   104 LRGRMEELQEESAAVSASKSRAEASVHAMMKE-------NQELMKKVLELDEKLQNCSKENEESK 161

  Fly   183 K---------EQIKAQLHDLLRRLSITLGMDVCDGNQNSHATPECIISRAEEVMVELQRTKAKVS 238
            |         |:.:|||||       .|.:|    .::..|:.|.:|.:..|:..|....|.:::
Mouse   162 KQGSEHLRRHEEFRAQLHD-------CLSLD----KKHEEASDEDLILKLRELYKEPTFLKGQLA 215

  Fly   239 STCDTLSSCENEL-LNLKSLANI----------------EKQRLTAQLDGAGNHNHELEGRCRQY 286
            :..:|::..|.|. .|.:::..:                ||.:|...|..|      :||| ...
Mouse   216 TLEETVTVHEMEAKANRETIRRLAAEVSREQTKAASWAEEKDKLNQDLLSA------VEGR-TAL 273

  Fly   287 ERDLQIQRDRLTESEINGEKLKEELRGFESRCHRLQNNL-------DRTQGDRLQFLRGLSNLL- 343
            ||::::.::||..|:...:..|:||.....||..|..:|       ..:|.....|...|:.|| 
Mouse   274 EREVKLYQERLLASQRAWDASKQELTQLRKRCQELDVSLKASREATTASQSRNSCFREKLTALLC 338

  Fly   344 ---NVPEPCETLIKDKLREILAENQA-------MHAQMHSLRDQLNSE---HEKLKETQQTTECR 395
               :..|..|..|.:::||:..|.::       :.||:.....:|.:|   |:|..:.....|.:
Mouse   339 SRFDTAESTEDAILERIRELGIEEESQRRMASQLEAQISEFVGKLGNESESHQKALQRAHVAEKK 403

  Fly   396 LRSGEAQKCELTERLEKCHAEIHTLRKDHMGLSEFLQRLALAMNWGECSAPPALGTDTNLMAENL 460
            |.:.::|...|...|.........|..:.....:||.:|...|..|..:|.  ||.|..|  :.:
Mouse   404 LEALQSQLSHLEGELLSGDVVRDNLFLEKQKYLKFLDQLTEKMKLGHVAAD--LGFDVCL--DVV 464

  Fly   461 LERAERLAAHCDHEAPHHHHHHHSPDKGCCDHGHGHGKLRRERSCHDIPLKESSSVYNLQRRVRV 525
            |.|.|:|                               :|.|.:.   .::..:..:||||:::.
Mouse   465 LARIEQL-------------------------------VRLESNA---VIENKTMAHNLQRKLKT 495

  Fly   526 LREQVQRRDLHLELLRRKLAIIEDGARGKCMLQGERDEAVCRAKKAAKQVDKLSAQLADARSQIA 590
            .:|:::.:::|:.|||:|:|.::.....:..|..|||||....:|..|:::::..:|:..:....
Mouse   496 QKERLESKEVHMNLLRQKIAQLQQEKEARSALAVERDEAHLAMRKLEKKLERMQKELSACQEHNT 560

  Fly   591 EVKAQLAEAVEYKITSLERARKIDELTTQICDLEDEKTRLLSQLNALKERLKSSCESNQNRRCRD 655
            |:||:||:..|.||.:||:.:.|::|.....:||..|.....:|..:...|:::.:..:..:.|.
Mouse   561 ELKAKLADTNELKIKTLEQTKAIEDLNQSRDELEKMKENAEKKLMLVMSELENTEQEARAHQERS 625

  Fly   656 EALINSMRDDVSRLSSQLSDANQRLSHLQSFRTSVARTLHL----RDLPETDLLHRLQALCSAHQ 716
            .|:|.....::..|...|.:|.:|...|..||..|:..|.|    .|.|:.:::..|:.|..:|:
Mouse   626 RAMIELASLELKTLRKSLDEAERRGMQLADFREVVSSMLGLNMTSHDPPDYEIIKCLERLLHSHR 690

  Fly   717 EFTMLSKRYETASPVGDH----PCPRFDDPIPPS---SHCR 750
            ..              .|    ||....|.....   ||||
Mouse   691 HH--------------HHHHFVPCACLQDMAAEQGSCSHCR 717

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43338NP_001246080.1 SMC_prok_B <77..412 CDD:274008 96/396 (24%)
SMC_prok_A 305..>644 CDD:274009 83/359 (23%)
Ccdc170NP_001357921.1 Smc 34..>658 CDD:224117 161/681 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834092
Domainoid 1 1.000 158 1.000 Domainoid score I4097
eggNOG 1 0.900 - - E1_28JEG
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H69393
Inparanoid 1 1.050 159 1.000 Inparanoid score I4241
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG50021
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007014
OrthoInspector 1 1.000 - - oto93408
orthoMCL 1 0.900 - - OOG6_108155
Panther 1 1.100 - - LDO PTHR18863
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R7288
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.790

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