DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43338 and LOC100488825

DIOPT Version :9

Sequence 1:NP_001246080.1 Gene:CG43338 / 35117 FlyBaseID:FBgn0263079 Length:853 Species:Drosophila melanogaster
Sequence 2:XP_002933761.3 Gene:LOC100488825 / 100488825 -ID:- Length:778 Species:Xenopus tropicalis


Alignment Length:782 Identity:162/782 - (20%)
Similarity:329/782 - (42%) Gaps:148/782 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TNGNTPEDWQVFEVLFGADQDPKTIPAR----MTTMSPLPQPAIPF-CQLDTSCSNTGITVTEHH 68
            |.....::.|..|.|:..|:|.....||    ......|.:..||: .:|:.|.|...:.     
 Frog    31 TGSRRSQELQEKESLYANDEDRFPTNARHFPGNRVFDSLGEVTIPYDPELEFSSSRDQLM----- 90

  Fly    69 HGLDLTTTLRSELAALSYKKERLTGELAEARAALCSKDADIENLRAQA-------ARQTALIGSL 126
            |.........||.|||..|...|..|:::.::.|.:||..::.::.:.       |||.:.|.||
 Frog    91 HYRRAAEASHSEYAALLVKNNSLQAEVSDLKSRLAAKDVFLQKVKDELVSYKENNARQLSQIHSL 155

  Fly   127 QSRLQNSESREQAVQA-RCDSTIQ--TVQREKRSSDERNKELICKIQHLET----HMASEESQKE 184
            :..::..|....:|.: :.::.::  .::|:       ||||..::|.||.    |:...|..::
 Frog   156 KDHIKELEYMSASVNSGKAETNVELCALRRD-------NKELNERVQELENRIRMHLIEREKTEQ 213

  Fly   185 Q---IKAQLHDLLRRLSITLGMDVCDGNQNSHATPECIISRAEEVMVELQRTKAKVSSTCDTLSS 246
            :   ::.::.:.:.:|...|.|||    :........::::.|:::.|....|:|:||..:.|:.
 Frog   214 KFNGLEKKMKESIGKLCSCLNMDV----EEQEDPLNILLTKVEKLIKEHFVQKSKLSSLEEVLAG 274

  Fly   247 CENE-------LLNLKSLANIEKQRLTAQLDGAGNHNHELEGRCRQYERDLQIQRDRLTESEING 304
            .:.|       ::.|  ::.|:|.:.|..:         ||.:.:..:|    :||....::.:.
 Frog   275 RQVEYKASRETIVQL--VSEIDKHKKTVAV---------LEAQLKSIKR----ERDETLLAKQSA 324

  Fly   305 EKLKEELRG-----------FESRCHRLQ---NNLDRT---------------QGDRLQFLRGLS 340
            |:.||.|.|           |:....|.:   |.||||               |...:|....||
 Frog   325 EQEKELLLGKIKDNHKEWSSFQQELVRKEKKLNELDRTLRTSDYEAKASHSLHQSFIIQLATVLS 389

  Fly   341 N-LLNVPEPCETLIKDKLREILAENQ-------AMHAQMHSLRDQLNSE----HEKLKETQQTTE 393
            | .:.||. .|..||::::||.:..|       .:..::..|..||:.:    ||.:.:..:..|
 Frog   390 NGFITVPR-TEEAIKERIQEICSREQEWKVTTDELQEKVLKLTKQLDQQRDLYHEAVTKAYKAEE 453

  Fly   394 CRLRSGEAQKCELTERLEKCHAEIHTLRKDHMGLSEFLQRLALAMNWGECSAPPALGTDTNLMAE 458
            ....:.|:.| .|..:|............:...|.:||.::|..:|..:..:..:|.:    ..|
 Frog   454 ILQENQESLK-HLKGKLTSEEMIKDGFNSERKKLKKFLLQMAEKLNVVQDISSGSLTS----QYE 513

  Fly   459 NLLERAERLAAHCDHEAPHHHHHHHSPDKGCCDHGHGHGKLRRERSCHDIPLKESSS-VYNLQRR 522
            .||.|||.:...               |||.                    ||:|.: :||||::
 Frog   514 VLLNRAEEVTER---------------DKGF--------------------LKDSKTLIYNLQKK 543

  Fly   523 VRVLREQVQRRDLHLELLRRKLAIIEDGARGKCMLQGERDEAVCRAKKAAKQVDKLSAQLADARS 587
            :....|:::.:...:|.|.:|:..:|.....:.:|..|...:: .|:|..|:|::|..||::.:.
 Frog   544 ITSQAEKIELKSTKIEQLEKKIKQLEKEKEQQLLLSAENSGSL-TAQKLQKKVERLQGQLSEMKI 607

  Fly   588 QIAEVKAQLAEAVEYKITSLERARKIDELTTQICDLEDEKTRLLSQLNALKERLKSSCESNQNRR 652
            ....:.|||.:..:.|..::::.:.|:||:..:..||..|.:...::.:||..|..|....:..:
 Frog   608 TTQTLTAQLVDMSDLKERNMQQKKTIEELSRALEKLEKIKEKAAKKVVSLKTELDYSEHEFRGDK 672

  Fly   653 CRDEALINSMRDDVSRLSSQLSDANQRLSHLQSFRTSVAR----TLHLRDLPETDLLHRLQALCS 713
            .|.:.::.::.:::......|.:..:|...|..||.::.|    .|:...:|:.::..:|:.:..
 Frog   673 ERCQHMVEAVTNELHTAKRALEEVAKREKQLVYFREAITRMMGFNLNTLAVPDHEIFDQLKRVLR 737

  Fly   714 AH 715
            .|
 Frog   738 TH 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43338NP_001246080.1 SMC_prok_B <77..412 CDD:274008 86/399 (22%)
SMC_prok_A 305..>644 CDD:274009 84/380 (22%)
LOC100488825XP_002933761.3 Smc 93..>703 CDD:224117 139/677 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 176 1.000 Domainoid score I3560
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 176 1.000 Inparanoid score I3934
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007014
OrthoInspector 1 1.000 - - otm48451
Panther 1 1.100 - - O PTHR18863
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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