DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43338 and ccdc170

DIOPT Version :9

Sequence 1:NP_001246080.1 Gene:CG43338 / 35117 FlyBaseID:FBgn0263079 Length:853 Species:Drosophila melanogaster
Sequence 2:XP_031758289.1 Gene:ccdc170 / 100145067 XenbaseID:XB-GENE-988262 Length:764 Species:Xenopus tropicalis


Alignment Length:810 Identity:191/810 - (23%)
Similarity:340/810 - (41%) Gaps:159/810 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LNPRPTTNGNTPEDWQVFEVLFGADQDPKTIPARMTTMSPLPQPAIPFCQLDTSCS--------- 58
            :|..||::|....|         |....:.|.....|......|.||..:.|:...         
 Frog     9 INDNPTSSGAAKAD---------ASHSSRFIDVNSNTAFRSLSPTIPISRGDSGVQEQYPIHKWQ 64

  Fly    59 -----------NTG---------------------ITVTEHHHGLDLTTTLRSELAALSYKKERL 91
                       :||                     :|..:.:|...:....:||||||..|.|.:
 Frog    65 AEHLDDSPATWSTGRQKTRGELLKSSFDPLLPDIPVTREQMNHYRIIAENAQSELAALHVKFESV 129

  Fly    92 TGELAEARAALCSKD-------ADIENLRAQAARQTALIGSLQSRLQNSE---SREQAVQARCDS 146
            ..||.:.||.|.||:       |::||.:...|||.:||.||::|||.:|   ||....:.|.|.
 Frog   130 QTELLDLRARLASKEGSVQELRAEVENYKENTARQASLISSLRARLQETEEESSRFATSKTRADF 194

  Fly   147 TIQTVQREKRSSDERNKELICKIQHLETHMASEESQKEQIKAQLH-------DLLRRLSITLGMD 204
            .:|.|.:|       |:||..::..|::.:.|..:|.|:.|::..       ..|.:||..|.::
 Frog   195 AMQAVLQE-------NQELKERMHDLDSRLKSSVAQWEESKSKASRYSRSHGQFLSQLSTCLNIN 252

  Fly   205 VCDGNQNSHATPECIISRAEEVMVELQRTKAKVSSTCDTLSSCENE-------LLNLKSLANIEK 262
            :    :......|.::|:..|:..:....|..::|...|::..|.|       ::.|.|..:.|:
 Frog   253 I----RGQEEPEELLLSKINELYKDNTELKGSIASLEQTVNVHETESKGSRETIMRLVSEVSKEQ 313

  Fly   263 QRLTA---QLDGAGNHNHELEGRCRQYERDLQIQRDRLTESEINGEKLKEELRGFESRCHRLQNN 324
            ::.::   |||....:...........||:::|.:|||:.|:...|..|:||...:.....|..:
 Frog   314 KKASSFAKQLDSLQKNLESTSDDKESLEREIKILKDRLSASQRAWEASKQELGQVKKSSTELDLS 378

  Fly   325 LDRTQGD-----------RLQFLRGLSNLLNVPEPCETLIKDKLREIL--AENQ-----AMHAQM 371
            |..|:|:           :......||:.....:|.|..|.:|:|::.  |||:     .:..::
 Frog   379 LKSTRGEAKAAHSLHESFKETVAAALSHDSIAVKPKEEAILEKIRDMYHKAENRKTIISQLEERV 443

  Fly   372 HSLRDQLNSEHEKLKETQQTTECRLRSGEAQKCELTERLEKCHAEI-------HTLRKDHMGLSE 429
            ..|.:||.::    .|..|.:..|.|..|....:|..||:....|:       ..|..:.....:
 Frog   444 FKLSEQLQTQ----TELHQESMSRARKAEQYLDDLGGRLKLAEGELVSGDVMRDNLSHEKQKYMK 504

  Fly   430 FLQRLALAMNWGECSAPPALGTDTNLMAENLLERAERLAAHCDHEAPHHHHHHHSPDKGCCDHGH 494
            ||::|:..|.....:..  :|.|..|  |.:|.||::|.                          
 Frog   505 FLEQLSEKMKIDRVATD--VGFDMRL--EAILGRADQLV-------------------------- 539

  Fly   495 GHGKLRRERSCHDIPLKESSSVYNLQRRVRVLREQVQRRDLHLELLRRKLAIIEDGARGKCMLQG 559
               ||..     :..::..:....|||:::..:|.:..::||:||||:|:|.:|:..:.:..|..
 Frog   540 ---KLET-----NAIIENKTRAQGLQRKLKAQKETIDSKELHMELLRKKIAQLEEEKQVRTALAV 596

  Fly   560 ERDEAVCRAKKAAKQVDKLSAQLADARSQIAEVKAQLAEAVEYKITSLERARKIDELTTQICDLE 624
            |||||....::..|:||:|..:|..|......:||:|::..|.||.::|:.:.|:||...:..||
 Frog   597 ERDEANLTVRRLQKKVDRLQKELNVALDSNTGLKARLSDTNELKIKTIEQHKTIEELNKSVDQLE 661

  Fly   625 DEKTRLLSQLNALKERLKSSCESNQNRRCRDEALINSMRDDVSRLSSQLSDANQRLSHLQSFRTS 689
            .||.:...:|.::|..|:.:....|..:.|...|:..:..::..|...|.:..:|...|..||..
 Frog   662 KEKGKTQKKLVSVKSELEFTERDAQEEKERSANLLEVVTSELKTLKKTLEEVVKREKQLVDFREV 726

  Fly   690 VARTLHLR----DLPETDLLHRLQALCSAH 715
            |:|.|.|.    .||:.:::.||:.|...|
 Frog   727 VSRMLGLNVNVLALPDYEIIKRLEGLIHNH 756

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43338NP_001246080.1 SMC_prok_B <77..412 CDD:274008 98/379 (26%)
SMC_prok_A 305..>644 CDD:274009 87/363 (24%)
ccdc170XP_031758289.1 SMC_prok_B 102..>720 CDD:274008 163/670 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 176 1.000 Domainoid score I3560
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H69393
Inparanoid 1 1.050 176 1.000 Inparanoid score I3934
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D178699at33208
OrthoFinder 1 1.000 - - FOG0007014
OrthoInspector 1 1.000 - - otm48451
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
77.060

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