DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp310a1 and Cyp26a1

DIOPT Version :9

Sequence 1:NP_609891.1 Gene:Cyp310a1 / 35115 FlyBaseID:FBgn0032693 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_031837.2 Gene:Cyp26a1 / 13082 MGIID:1096359 Length:497 Species:Mus musculus


Alignment Length:530 Identity:121/530 - (22%)
Similarity:207/530 - (39%) Gaps:113/530 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLPILLYSAVFLSVRHIY---SHWRRRGFPSEKAGITWSFLQKA-----YRREFRHVEAICEAYQ 60
            :||:||:.|. |.:..:|   |..|....|.....:.:.|..:.     .||:|..:        
Mouse    15 VLPLLLFLAA-LKLWDLYCVSSRDRSCALPLPPGTMGFPFFGETLQMVLQRRKFLQM-------- 70

  Fly    61 SGKDRLLGI----YCFFRPVLLVRNVELAQTILQQSNGHFSELKWDYISGYRRFNLLEKLAPMFG 121
              |.|..|.    :.|.||.:.|...:..:.||...: ....:.|.           ..:..:.|
Mouse    71 --KRRKYGFIYKTHLFGRPTVRVMGADNVRRILLGEH-RLVSVHWP-----------ASVRTILG 121

  Fly   122 TKRLSEMFGQVQKVGDHLIHHLLDRQGQGC-----PQEVDI---------QQKLRVY------SV 166
            ...||.:.....|....:|.....|:...|     .:||..         ::.|.||      ..
Mouse   122 AGCLSNLHDSSHKQRKKVIMQAFSREALQCYVPVIAEEVSSCLEQWLSCGERGLLVYPEVKRLMF 186

  Fly   167 NIIANLIYGLD---INNFEHEDHILTSYLSHSQASIQSFTLG-RLPQKSSYT-YRLRDLIKQSVE 226
            .|...::.|.:   ....|.|..::.::   .:.:...|:|. .:|....|. .:.|:||...:|
Mouse   187 RIAMRILLGCEPGPAGGGEDEQQLVEAF---EEMTRNLFSLPIDVPFSGLYRGVKARNLIHARIE 248

  Fly   227 ------------LREDHGLIRKDILQLLVRFRNGNEVSGDKWQLEPINDADKLLSIKRLAKVAED 279
                        ...|.|.  ||.||||:.         ..|      :..:.|.::.|.:.:.:
Mouse   249 ENIRAKIRRLQATEPDGGC--KDALQLLIE---------HSW------ERGERLDMQALKQSSTE 296

  Fly   280 LLKVSLDAVASTVTFTLLEILQEPLIVEKLRAEIKE-----LSNENGQLKFEELNGLRYMDMCLK 339
            ||....:..||..|..:..:...|.:::|:|.|||.     .||::.:|..|.|..|:|....:|
Mouse   297 LLFGGHETTASAATSLITYLGLYPHVLQKVREEIKSKGLLCKSNQDNKLDMETLEQLKYTGCVIK 361

  Fly   340 ETLRKYPPLPIIERVCRKSYSLPNSKFTIDEGKTLMVPLLAMHRDEKYFSEPMKYKPLRFLQTAN 404
            ||||..||:|...||..|::.|  :.:.|.:|..::..:...|.....|:...::.|.||:    
Mouse   362 ETLRLNPPVPGGFRVALKTFEL--NGYQIPKGWNVIYSICDTHDVADIFTNKEEFNPDRFI---- 420

  Fly   405 DVGQCEDKTKSNVFIGFGIGGSQCVGQNFAKLVIKVALIKLLQNFHLELDANQVKTLK------- 462
             |...||.::.: ||.||.|...|||:.|||:::|:..::|.::...:| .|...|:|       
Mouse   421 -VPHPEDASRFS-FIPFGGGLRSCVGKEFAKILLKIFTVELARHCDWQL-LNGPPTMKTSPTVYP 482

  Fly   463 VSHRPAPFIH 472
            |.:.||.|.|
Mouse   483 VDNLPARFTH 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp310a1NP_609891.1 p450 69..454 CDD:299894 95/430 (22%)
Cyp26a1NP_031837.2 p450 43..491 CDD:299894 110/498 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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