DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10333 and RH20

DIOPT Version :10

Sequence 1:NP_609888.2 Gene:CG10333 / 35112 FlyBaseID:FBgn0032690 Length:822 Species:Drosophila melanogaster
Sequence 2:NP_001322402.1 Gene:RH20 / 841958 AraportID:AT1G55150 Length:526 Species:Arabidopsis thaliana


Alignment Length:452 Identity:179/452 - (39%)
Similarity:271/452 - (59%) Gaps:48/452 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   368 MTERDWRIFREDYNVTIKGGRIPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNR 432
            ||:.:...:|:...:|::|..||.|::|:.:.|||..:::.:.|.|:.||||||.|..|:.::.|
plant    98 MTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGR 162

  Fly   433 DIIGVAETGSGKTLAFLIPLLSWIQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEEETTKFGQP 497
            |:||:|||||||||::|:|.:..:.:.|.:..    ..||..:::|||||||.||::|.:|||..
plant   163 DLIGIAETGSGKTLSYLLPAIVHVNAQPMLAH----GDGPIVLVLAPTRELAVQIQQEASKFGSS 223

  Fly   498 LGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGF 562
            ..|:|..:.||:.:..|...|:.|.||||||||||||::|:....|.:.||:||||||||:||||
plant   224 SKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGF 288

  Fly   563 EPDVQKILEYMPVTNLKPDTEEAEDETKLMENFYTKKKYRQTVMFTATMPPAVERLARTYLRRPA 627
            :|.::||     |::::||                    |||:.::||.|..||:|::.:|..|.
plant   289 DPQIRKI-----VSHIRPD--------------------RQTLYWSATWPKEVEQLSKKFLYNPY 328

  Fly   628 TVYIGSVG-KPTERTEQIVYMMGENDKRKKLMEILSRKID-PPVIIFVNQKKGADVLAKGLEKLG 690
            .|.|||.. |......|||.::.|:.|..||:::|...:| ..:::|::.|||.|.:.:.|...|
plant   329 KVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTKKGCDQITRQLRMDG 393

  Fly   691 YNSCTLHGGKGQEQREYALAALKSGAKDILVATDVAGRGIDIKDVSLVINYDMAKTIEDYTHRIG 755
            :.:.::||.|.|.:|::.|:..:||...|:.|||||.||:|:|||..|||||...::|||.||||
plant   394 WPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIG 458

  Fly   756 RTGRAGKTGCAISFVT-------KDDSALFYDLKQCVSASPVSTCPPEL--MNHPEAQHKPG 808
            ||||||..|.|.:|.|       |:.:.:..:..|.||        |||  |....|...||
plant   459 RTGRAGAKGTAYTFFTVANARFAKELTNILQEAGQKVS--------PELASMGRSTAPPPPG 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10333NP_609888.2 DUF5401 <66..354 CDD:375164
SrmB 395..783 CDD:440279 161/396 (41%)
RH20NP_001322402.1 DEAD-like_helicase_N 81..520 CDD:475120 179/452 (40%)
Blue background indicates that the domain is not in the aligned region.

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