DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10333 and ddx3xa

DIOPT Version :10

Sequence 1:NP_609888.2 Gene:CG10333 / 35112 FlyBaseID:FBgn0032690 Length:822 Species:Drosophila melanogaster
Sequence 2:XP_021334401.1 Gene:ddx3xa / 566947 ZFINID:ZDB-GENE-030131-1565 Length:841 Species:Danio rerio


Alignment Length:645 Identity:210/645 - (32%)
Similarity:295/645 - (45%) Gaps:145/645 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 PDRRERGG-GRDRGDRIDRGERGDDKRAEDLTHKDKEKELEAIRERYLGIIKKKRRVRRLNDRKF 275
            |.|.:||| |..||:|...........|...|:::|                             
Zfish   212 PLRNDRGGRGGFRGNRNGASFNQPVHNAGYGTYENK----------------------------- 247

  Fly   276 VFDWDAGEDTSIDYNNLYKERHHVQFFGRGNVAGIDIKEQKRTQSKFYGDLLEKRRTEAEK---- 336
                |.|      :|::.....:..|.||.:          |.:|.|:.|.....|...|:    
Zfish   248 ----DGG------WNSVVNRDAYASFGGRSD----------RGKSAFFNDRGASSRGRYERGGFG 292

  Fly   337 ----------EQEKVRLKKMKRKEDKQKWDDRHWSEK-------ENDEMTERDWRIFREDYN--- 381
                      |:.:               |:..||:.       |::..:..:..|..|.|:   
Zfish   293 GGTGGNSRWVEESR---------------DEEDWSKPMPPNERLEHELFSASNTGINFEKYDDIP 342

  Fly   382 VTIKGGRIPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTL 446
            |...|...|..|.|:::....:.|:..|....|..|||:|:.||||....||::..|:||||||.
Zfish   343 VEATGTNSPGHIESFHDVDMGEIIMGNITLSRYTRPTPVQKYAIPIIKTKRDLMACAQTGSGKTA 407

  Fly   447 AFLIPLLSWIQSLPKIERLEDV--------------DQGPYAIIMAPTRELAQQIEEETTKFGQP 497
            |||:|:||.|.|....|.|:..              .|.|.::::|||||||.||.:|..||...
Zfish   408 AFLLPVLSQIYSEGPGEALQATKASTQQENGKYVRRKQYPISLVLAPTRELALQIYDEARKFAYR 472

  Fly   498 LGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGF 562
            ..:|..||.||....:|...|..||.:::||||||:|::|...:.|:.|.|:||||||||:||||
Zfish   473 SRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDYCKYLVLDEADRMLDMGF 537

  Fly   563 EPDVQKILEY--MPVTNLKPDTEEAEDETKLMENFYTKKKYRQTVMFTATMPPAVERLARTYLRR 625
            ||.:::|:|.  ||                       .|..|||:||:||.|..::.|||.:|..
Zfish   538 EPQIRRIVEQDTMP-----------------------PKGSRQTMMFSATFPKEIQILARDFLEE 579

  Fly   626 PATVYIGSVGKPTERTEQIVYMMGENDKRKKLMEILSRK-IDPPVIIFVNQKKGADVLAKGLEKL 689
            ...:.:|.||..:|...|.|..:.|||||..|:::|:.. .|...::||..|||||.|...|.:.
Zfish   580 YIFLAVGRVGSTSENITQKVVWVEENDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYRE 644

  Fly   690 GYNSCTLHGGKGQEQREYALAALKSGAKDILVATDVAGRGIDIKDVSLVINYDMAKTIEDYTHRI 754
            ||...::||.:.|..||.||...:||...|:|||.||.||:||.:|..|||:|:...||:|.|||
Zfish   645 GYACTSIHGDRSQRDREEALHQFRSGRCPIMVATAVAARGLDISNVKHVINFDLPSDIEEYVHRI 709

  Fly   755 GRTGRAGKTGCAISF-------VTKDDSALFYDLKQCVSASPVSTCPPELMNHP-EAQHK 806
            |||||.|..|.|.||       :|||...:..:.||.|        |..|.|.. |.|||
Zfish   710 GRTGRVGNLGLATSFYNDKNSNITKDLLDILVEAKQEV--------PSWLENLAYEHQHK 761

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10333NP_609888.2 DUF5401 <66..354 CDD:375164 25/156 (16%)
SrmB 395..783 CDD:440279 164/411 (40%)
ddx3xaXP_021334401.1 DEADc_DDX3 335..590 CDD:350809 104/277 (38%)
SF2_C_DEAD 595..725 CDD:350174 60/129 (47%)

Return to query results.
Submit another query.