DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10333 and ddx17

DIOPT Version :10

Sequence 1:NP_609888.2 Gene:CG10333 / 35112 FlyBaseID:FBgn0032690 Length:822 Species:Drosophila melanogaster
Sequence 2:NP_001313320.2 Gene:ddx17 / 556764 ZFINID:ZDB-GENE-030131-18 Length:667 Species:Danio rerio


Alignment Length:512 Identity:184/512 - (35%)
Similarity:277/512 - (54%) Gaps:67/512 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   342 RLKKMKRKEDK-QKWDDRHWSEK-ENDEMTERDWRIFREDYNVTIKGGRIPNPIRSWNESGFPKE 404
            ||:|.|...|: .|::...::|. |...|::.|...:|....:|::|...|.|:.:::::.||:.
Zfish    41 RLRKKKWDLDQLPKFEKNFYNENPEVHHMSQYDVEEYRRKREITVRGSGCPKPVTNFHQAQFPQY 105

  Fly   405 IIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLSWIQSLPKIERLEDVD 469
            ::|::.:..:||||.||.|..|:.|..||::|:|:||||||||:|:|.:..|...|.:||    .
Zfish   106 VMDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLER----G 166

  Fly   470 QGPYAIIMAPTRELAQQIEEETTKFGQPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLID 534
            .||..:::|||||||||:::....:|:...|::..|.||..:..|...|..|.||.|||||||||
Zfish   167 DGPICLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLID 231

  Fly   535 VLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDETKLMENFYTKK 599
            .||.....|.:|||:||||||||:||||||.::||     |..::||                  
Zfish   232 FLEVGKTNLRRCTYLVLDEADRMLDMGFEPQIRKI-----VDQIRPD------------------ 273

  Fly   600 KYRQTVMFTATMPPAVERLARTYLRRPATVYIGSVG-KPTERTEQIVYMMGENDKRKKLM----E 659
              |||:|::||.|..|.:||..:|:....:.||::. .......|||.:..||:|..||:    |
Zfish   274 --RQTLMWSATWPKEVRQLAEDFLQDYVQINIGALELSANHNILQIVDVCMENEKDNKLIQLMEE 336

  Fly   660 ILSRKIDPPVIIFVNQKKGADVLAKGLEKLGYNSCTLHGGKGQEQREYALAALKSGAKDILVATD 724
            |::.| :...||||..||..|.|.:.:.:.|:.:..:||.|.|.:|::.|...:||...||:|||
Zfish   337 IMAEK-ENKTIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATD 400

  Fly   725 VAGRGIDIKDVSLVINYDMAKTIEDYTHRIGRTGRAGKTGCAISFVT-------KDDSALFYDLK 782
            ||.||:|::||..|||||...:.|||.||||||.|:...|.|.:|.|       :|...:..:.:
Zfish   401 VASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEAR 465

  Fly   783 QCVS---------------------ASPVSTCPPELMNHPEAQH--KPGTVVTKKRR 816
            |.::                     .:..|:..|.||...|...  :.||.|.|..|
Zfish   466 QAINPKLLQLVDTGRGGGGGRMRYRGNNSSSNNPNLMYQDECDRRMRSGTGVNKGGR 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10333NP_609888.2 DUF5401 <66..354 CDD:375164 5/12 (42%)
SrmB 395..783 CDD:440279 158/399 (40%)
ddx17NP_001313320.2 None

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