DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10333 and CG7878

DIOPT Version :10

Sequence 1:NP_609888.2 Gene:CG10333 / 35112 FlyBaseID:FBgn0032690 Length:822 Species:Drosophila melanogaster
Sequence 2:NP_649767.1 Gene:CG7878 / 40959 FlyBaseID:FBgn0037549 Length:703 Species:Drosophila melanogaster


Alignment Length:820 Identity:238/820 - (29%)
Similarity:364/820 - (44%) Gaps:209/820 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DRPAV-------GNPRDRERERD---RVRERDRQFDREKERRQRRSRSREDRNRRRSPERQRPRD 72
            ::|||       .|..:|...||   |..:.||. |...|.|..|::..:....||.     .||
  Fly    13 EKPAVHQEYSKPNNKYERSIRRDGNSRAYKGDRN-DYGGEGRGYRAKRNDYGGGRRD-----NRD 71

  Fly    73 NVRERSRERGGGAGGGGGGGAEKKAKMDTGDAPPKPLIVDDEEQQDGKEAKVKKEPLSLEELLDK 137
            |.....|:....||||||..:|..:....        :|.....:.|......:...::...|||
  Fly    72 NYGAGHRDSRDSAGGGGGDFSESLSIASE--------MVGKVIGRGGSNISRIQNDFNVRVKLDK 128

  Fly   138 KKREEEARSKPVFLTK-----EQRALEAIKRRQEEVERQRAAHDAAREQMAAASKVSISMGTAMA 197
            ..          .:.|     :...::||...:::|..                           
  Fly   129 CD----------LIVKITGSIQSNVIDAINHVRKQVTN--------------------------- 156

  Fly   198 SGAPPPAIVAPPPKPDRRERGGGRDRGDRIDRGERGDDKRAEDLTHKDKEKELEAIRERYLGIIK 262
            ||             ||.:....||.|.. :|.:.|...|.:..:::......|:.::.      
  Fly   157 SG-------------DRGQDRDNRDHGSN-ERYDGGGYDRYKGNSYEFNPTSSESNKDN------ 201

  Fly   263 KKRRVRRLNDRKFVFDWDAGEDTSID------------YNNLYKERHHVQFFGRGNVAGIDIKEQ 315
                    .|...:.||:|....||.            ..|.|||...|     .|:        
  Fly   202 --------GDLTGIIDWEALNKASIAATAARWSKCPPLTKNFYKEAPEV-----ANL-------- 245

  Fly   316 KRTQSKFYGDLLEKRRTEAEKEQEKVRLKKMKRKEDKQKWDDRHWSEKENDEMTERDWRIFREDY 380
                              .:.|.|::|                    :||:::|        ..|
  Fly   246 ------------------TKSEIERIR--------------------EENNKIT--------VSY 264

  Fly   381 NVTIKGGR----IPNPIRSWNE--SGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGVAE 439
            ....|.|.    ||||:.::.:  :.:| ::::.|.|:|:.:|:|||.||.||.||..|:||:|:
  Fly   265 VFEPKEGETSPPIPNPVWTFEQCFAEYP-DMLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQ 328

  Fly   440 TGSGKTLAFLIP--LLSWIQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEEETTKFGQPLGIRT 502
            ||:|||||||:|  :.:..||.|:..|     .|...:::|||||||.|||.|..|:.. .|::.
  Fly   329 TGTGKTLAFLLPGMIHTEYQSTPRGTR-----GGANVLVLAPTRELALQIEMEVKKYSF-RGMKA 387

  Fly   503 VVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQ 567
            |.|.||.:|..|...|..|.||:|.|||||.|::....:.::..||:||||||||:||||||.::
  Fly   388 VCVYGGGNRNMQISDLERGAEIIICTPGRLNDLIMANVIDVSTITYLVLDEADRMLDMGFEPQIR 452

  Fly   568 KILEYMPVTNLKPDTEEAEDETKLMENFYTKKKYRQTVMFTATMPPAVERLARTYLRRPATVYIG 632
            |::     .:::||                    |||:|.:||.||.|.|||::|::.|..|.:|
  Fly   453 KVM-----LDIRPD--------------------RQTIMTSATWPPGVRRLAQSYMKNPIQVCVG 492

  Fly   633 SVG-KPTERTEQIVYMMGEN-DKRKKLME-ILSRKIDPPVIIFVNQKKGADVLAKGLEKLGYNSC 694
            |:. ..|...:||:.:|.:: ||...:.. :.:......:|||..:|..||.|:..|...|:.:.
  Fly   493 SLDLAATHSVKQIIKLMEDDMDKFNTITSFVKNMSSTDKIIIFCGRKVRADDLSSELTLDGFMTQ 557

  Fly   695 TLHGGKGQEQREYALAALKSGAKDILVATDVAGRGIDIKDVSLVINYDMAKTIEDYTHRIGRTGR 759
            .:||.:.|..||.|:|.:|||...||||||||.||:||:|::.|||||....||:|.||:|||||
  Fly   558 CIHGNRDQMDREQAIADIKSGVVRILVATDVASRGLDIEDITHVINYDFPHNIEEYVHRVGRTGR 622

  Fly   760 AGKTGCAISFVTKDDSALFYDLKQCVSASPVSTCPPELMN 799
            ||:.|.:|||.|::|.|:..:|.:.:..:. ...|.||.|
  Fly   623 AGRQGTSISFFTREDWAMAKELIEILQEAE-QEVPDELHN 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10333NP_609888.2 DUF5401 <66..354 CDD:375164 46/304 (15%)
SrmB 395..783 CDD:440279 162/394 (41%)
CG7878NP_649767.1 KH_1 92..152 CDD:459630 9/77 (12%)
DEAD-like_helicase_N 174..663 CDD:475120 195/594 (33%)

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