DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10333 and Rm62

DIOPT Version :9

Sequence 1:NP_609888.2 Gene:CG10333 / 35112 FlyBaseID:FBgn0032690 Length:822 Species:Drosophila melanogaster
Sequence 2:NP_524243.2 Gene:Rm62 / 40739 FlyBaseID:FBgn0003261 Length:719 Species:Drosophila melanogaster


Alignment Length:682 Identity:202/682 - (29%)
Similarity:304/682 - (44%) Gaps:167/682 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 TKEQRALEAIKRRQE-----------EVERQRAAHDAAR-------------EQMAAASKVSISM 192
            |::::.....:|.:|           :.:.|||..|:::             ||.....|...:.
  Fly    67 TEQRQQFHGSRRNRETILFPSTYSSLQAQSQRAFRDSSKPDSDDYVDSIPKAEQRTRTRKSLFND 131

  Fly   193 GTAMASGAPPPAIVAPPPK----------------PDRRERGGGRDRGDRIDRGERGDDKRAEDL 241
            ............::||..:                .|||..|||   |:|...|..|.|      
  Fly   132 PDERTEEIKIEGVMAPHDRDFGHSGRGGRGGDRGGDDRRGGGGG---GNRFGGGGGGGD------ 187

  Fly   242 THKDKEKELEAIRERYLGIIKKKRRVRRLNDRKFVFDWDAGEDTSIDYNNLYKERHHVQFFGRGN 306
                           |.||  :..||.:..|       |.|..........:.:|       ||.
  Fly   188 ---------------YHGI--RNGRVEKRRD-------DRGGGNRFGGGGGFGDR-------RGG 221

  Fly   307 VAG---------IDIKEQKRTQSKFYGDLLEKRRTEAEKEQEKVRLKKMKRKEDKQKWDDRHWSE 362
            ..|         :|.......:..||                                       
  Fly   222 GGGGSQDLPMRPVDFSNLAPFKKNFY--------------------------------------- 247

  Fly   363 KENDEMTER---DWRIFREDYNVTIKGGRIPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQA 424
            :|:..:..|   :.:.:||:..:|:: |::||||:.::|...|..::..|.:.|||.||.||.|.
  Fly   248 QEHPNVANRSPYEVQRYREEQEITVR-GQVPNPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQG 311

  Fly   425 IPIGLQNRDIIGVAETGSGKTLAFLIPLLSWIQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEE 489
            .||.:...:.:|:|:|||||||.:::|.:..|.:...::|    ..||.|:::||||||||||::
  Fly   312 WPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQR----GDGPIALVLAPTRELAQQIQQ 372

  Fly   490 ETTKFGQPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEA 554
            ..|:||....:|...|.||..:..|...|:.||||||||||||||.|......|.:|||:|||||
  Fly   373 VATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEA 437

  Fly   555 DRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDETKLMENFYTKKKYRQTVMFTATMPPAVERLA 619
            |||:||||||.::||     |:.::||                    |||:|::||.|..|::||
  Fly   438 DRMLDMGFEPQIRKI-----VSQIRPD--------------------RQTLMWSATWPKEVKQLA 477

  Fly   620 RTYLRRPATVYIGSVG-KPTERTEQIVYMMGENDKRKKLMEILSRKIDP-----PVIIFVNQKKG 678
            ..:|.....:.|||:. .......|:|.:..|..|.:||..:||...|.     .:||||..|:.
  Fly   478 EDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRR 542

  Fly   679 ADVLAKGLEKLGYNSCTLHGGKGQEQREYALAALKSGAKDILVATDVAGRGIDIKDVSLVINYDM 743
            .|.|.:.:...|.....:||.|.|.:|::.|...:||..:||||||||.||:|:..:..|||:|.
  Fly   543 VDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDY 607

  Fly   744 AKTIEDYTHRIGRTGRAGKTGCAISFVTKDDS 775
            .:..|||.||||||||:...|.:.:|.||:::
  Fly   608 PQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNA 639

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10333NP_609888.2 DEADc 396..629 CDD:238167 96/232 (41%)
DEXDc 409..632 CDD:214692 94/222 (42%)
Helicase_C 651..761 CDD:278689 48/114 (42%)
Rm62NP_524243.2 PTZ00424 280..656 CDD:185609 155/389 (40%)
DEADc 283..488 CDD:238167 96/233 (41%)
HELICc 499..633 CDD:238034 52/133 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451768
Domainoid 1 1.000 102 1.000 Domainoid score I343
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9750
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47958
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.940

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