DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10333 and ddx41

DIOPT Version :9

Sequence 1:NP_609888.2 Gene:CG10333 / 35112 FlyBaseID:FBgn0032690 Length:822 Species:Drosophila melanogaster
Sequence 2:XP_017214653.1 Gene:ddx41 / 394020 ZFINID:ZDB-GENE-030131-1927 Length:136 Species:Danio rerio


Alignment Length:134 Identity:31/134 - (23%)
Similarity:54/134 - (40%) Gaps:42/134 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 DREKER----RQRRSRSREDRNRRRSPERQRPRDNVRERSRERGGGAGGGGGGGAEKKAKMDTGD 103
            :|.|:|    :.....|.:|......|.:.|.:..:::..|.||.|                   
Zfish     5 NRAKKRVYSEKSASEGSEDDDYVPYVPVKIRKQQMLQKVMRLRGKG------------------- 50

  Fly   104 APPKPLIVDDEEQQDGKEAKVKKE---PLSLEELLD-----KKK---REEEARSKPVFLTKEQRA 157
                  :.::|::..|.|.|.:.|   |.|...|||     |:|   |:|.|:.|.  |.:|::.
Zfish    51 ------LTEEEQKDSGGEQKDEDEGLGPRSNVSLLDQHQHLKEKAEARKESAKEKQ--LKEEEKI 107

  Fly   158 LEAI 161
            ||::
Zfish   108 LESV 111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10333NP_609888.2 DEADc 396..629 CDD:238167
DEXDc 409..632 CDD:214692
Helicase_C 651..761 CDD:278689
ddx41XP_017214653.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D183201at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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