DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10333 and vas

DIOPT Version :10

Sequence 1:NP_609888.2 Gene:CG10333 / 35112 FlyBaseID:FBgn0032690 Length:822 Species:Drosophila melanogaster
Sequence 2:NP_723899.1 Gene:vas / 26067080 FlyBaseID:FBgn0283442 Length:661 Species:Drosophila melanogaster


Alignment Length:592 Identity:196/592 - (33%)
Similarity:287/592 - (48%) Gaps:141/592 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 DRRERGGGRDRGDRIDRGERGDDKRAEDLTHKDKEKELEAIRERYLGIIKKKRRVRRLNDRKFVF 277
            ||.||||.| || |:||.|||.::                 .||..|...::||           
  Fly   146 DREERGGER-RG-RLDREERGGER-----------------GERGDGGFARRRR----------- 180

  Fly   278 DWDAGEDTSIDYNNLYK--ERHH------------VQFFGRGNVAGIDIKEQKRTQSKFYGDLLE 328
                .||...:.||:.:  ||..            ::.|..|..:||                  
  Fly   181 ----NEDDINNNNNIVEDVERKREFYIPPEPSNDAIEIFSSGIASGI------------------ 223

  Fly   329 KRRTEAEKEQEKVRLKKMKRKEDKQKWDDRHWSEKENDEMTERDWRIFREDYNVTIKGGRIPNPI 393
                                          |:|:..|              ..|.:.|..:|.||
  Fly   224 ------------------------------HFSKYNN--------------IPVKVTGSDVPQPI 244

  Fly   394 RSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLSWIQS 458
            :.:..:.....|||.::|.|||.|||||:.:||:....||::..|:||||||.|||:|:||.:  
  Fly   245 QHFTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSKL-- 307

  Fly   459 LPKIERLEDVDQG-PYAIIMAPTRELAQQIEEETTKFGQPLGIRTVVVVGGLSREEQGFRLRLGC 522
               :|...:::.| |..:|::||||||.||..|..||.....::..:|.||.|...|...:..||
  Fly   308 ---LEDPHELELGRPQVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGTSFRHQNECITRGC 369

  Fly   523 EIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAED 587
            .:||||||||:|.::..::......::||||||||:||||..|:::|:.::   .::|:      
  Fly   370 HVVIATPGRLLDFVDRTFITFEDTRFVVLDEADRMLDMGFSEDMRRIMTHV---TMRPE------ 425

  Fly   588 ETKLMENFYTKKKYRQTVMFTATMPPAVERLARTYLRRPATVYIGSVGKPTERTEQIVYMMGEND 652
                          .||:||:||.|..::|:|..:|:....|.||.||......:|.:|.:.:..
  Fly   426 --------------HQTLMFSATFPEEIQRMAGEFLKNYVFVAIGIVGGACSDVKQTIYEVNKYA 476

  Fly   653 KRKKLMEILSRKIDPPVIIFVNQKKGADVLAKGLEKLGYNSCTLHGGKGQEQREYALAALKSGAK 717
            ||.||:||||.:.| ..|:||..|:|||.||..|.:..:.:.::||.:.|.|||.||...|:|:.
  Fly   477 KRSKLIEILSEQAD-GTIVFVETKRGADFLASFLSEKEFPTTSIHGDRLQSQREQALRDFKNGSM 540

  Fly   718 DILVATDVAGRGIDIKDVSLVINYDMAKTIEDYTHRIGRTGRAGKTGCAISFVTKD-DSALFYDL 781
            .:|:||.||.||:|||::..||||||...|:||.||||||||.|..|.|.||...: |.|:..||
  Fly   541 KVLIATSVASRGLDIKNIKHVINYDMPSKIDDYVHRIGRTGRVGNNGRATSFFDPEKDRAIAADL 605

  Fly   782 KQCVSAS 788
            .:.:..|
  Fly   606 VKILEGS 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10333NP_609888.2 DUF5401 <66..354 CDD:375164 30/154 (19%)
SrmB 395..783 CDD:440279 157/389 (40%)
vasNP_723899.1 SrmB 247..617 CDD:440279 158/395 (40%)

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