DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10333 and Ddx46

DIOPT Version :10

Sequence 1:NP_609888.2 Gene:CG10333 / 35112 FlyBaseID:FBgn0032690 Length:822 Species:Drosophila melanogaster
Sequence 2:NP_620798.1 Gene:Ddx46 / 245957 RGDID:708480 Length:1032 Species:Rattus norvegicus


Alignment Length:852 Identity:284/852 - (33%)
Similarity:418/852 - (49%) Gaps:147/852 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KRRSRS----RERHREDRPAVGNPRDRERERDRVRERDRQFDREKER-RQRRSRSREDRNRRRSP 65
            :.||||    |.:..:||.:  ..|||:|.|:|.|.||::..|.::| |.||||||| |:|.|..
  Rat    21 RSRSRSPSDKRSKRGDDRRS--RSRDRDRRRERSRSRDKRRSRSRDRKRLRRSRSRE-RDRSRER 82

  Fly    66 ERQRPRDNVRERSRERGGGAGGGGGGGAEKKAKMDTGDAPPKPLIVDDEEQQDGKEAKVKKEPLS 130
            .|.|.||..|.|||.||..:.....|...|||:..:.         ..|:.:.|..:|.||:   
  Rat    83 RRSRSRDRRRSRSRSRGRRSRSSSPGSKSKKAENRSR---------SKEKAEGGDSSKEKKK--- 135

  Fly   131 LEELLDKKKREEEARSKPVFLTKEQRALEAIKRRQEEVERQRAAHDAAREQMAAASKVSISMGTA 195
                 ||..:|:| :.|......:.:..|.:::|:|.||:.|      .||...|.:   ::|..
  Rat   136 -----DKDDKEDE-KEKDAGNFDQNKLEEEMRKRKERVEKWR------EEQRKKAME---NIGEL 185

  Fly   196 MASGAPPPAIVAPPPKPDRRERGGGRDRGDRIDRGERGDDKRAEDLTHKDKEKELEAIRERYLGI 260
                           |.:..|...|:......|..:..|...||...::.:::||:.: :.|:..
  Rat   186 ---------------KKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEDEELDPL-DAYMEE 234

  Fly   261 IKKKRRVRRLNDRKFVFDWDAGEDTSIDYNNLYKERHHVQFFGRGN-----------VAGIDIKE 314
            :|::  |::.|.|..     .|                    |.||           |..:..|:
  Rat   235 VKEE--VKKFNMRSV-----KG--------------------GAGNEKKSGPTVTKVVTVVTTKK 272

  Fly   315 QKRTQSKFYGDLLEKRR--TEAEKEQEKVRL-----------KKMKRKEDKQKWDDRHWSEK--- 363
            ......|..|:|:|..:  .|...|:|:|.|           :|:....|..|.:...:.:.   
  Rat   273 AVVDADKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYV 337

  Fly   364 ---ENDEMTERDWRIFR-EDYNVTIKGGRIPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQA 424
               |..:|::.:..:|| |...:|:||...|.||:||.:.|...:|::.:.|.||::|||||.||
  Rat   338 EVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQA 402

  Fly   425 IPIGLQNRDIIGVAETGSGKTLAFLIPLLSWIQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEE 489
            ||..:..||:||:|:||||||:|||:|:...|.....:|.    .:||.|:||.||||||.||.:
  Rat   403 IPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE----GEGPIAVIMTPTRELALQITK 463

  Fly   490 ETTKFGQPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVL---ENRYLVLNQCTYIVL 551
            |..||.:.||:|.|.|.||....||...|:.|.||::.||||:||:|   ..|...|.:.||:||
  Rat   464 ECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVL 528

  Fly   552 DEADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDETKLMENFYTKKKYRQTVMFTATMPPAVE 616
            ||||||.||||||.|.:|     |.|::||                    ||||||:||.|.|:|
  Rat   529 DEADRMFDMGFEPQVMRI-----VDNVRPD--------------------RQTVMFSATFPRAME 568

  Fly   617 RLARTYLRRPATVYIGSVGKPTERTEQIVYMMGENDKRKKLMEILSR-KIDPPVIIFVNQKKGAD 680
            .|||..|.:|..|.:|.........||.|.::.|..|..||:|:|.. :....|||||::::.||
  Rat   569 ALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHAD 633

  Fly   681 VLAKGLEKLGYNSCTLHGGKGQEQREYALAALKSGAKDILVATDVAGRGIDIKDVSLVINYDMAK 745
            .|.|.|.:..|...:||||..|..|:..:...|:|...:||||.||.||:|:|.:.||:||....
  Rat   634 GLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPN 698

  Fly   746 TIEDYTHRIGRTGRAGKTGCAISFVTKDDSALFYDLKQCVSASPVSTCPPEL----MNHPEAQHK 806
            ..|||.||.|||||||..|.|.:|:|:|.:....|:.:.:..|..:. ||:|    .:..:.|..
  Rat   699 HYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAV-PPDLEKLWSDFKDQQKA 762

  Fly   807 PGTVVTK 813
            .|.::.|
  Rat   763 EGKIIKK 769

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10333NP_609888.2 DUF5401 <66..354 CDD:375164 65/311 (21%)
SrmB 395..783 CDD:440279 171/391 (44%)
Ddx46NP_620798.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..227 72/250 (29%)
DEADc_DDX46 361..582 CDD:350711 115/249 (46%)
Q motif 372..400 11/27 (41%)
SrmB 378..793 CDD:440279 176/422 (42%)
DEAD box 529..532 2/2 (100%)
KH-I_DDX46 929..1031 CDD:411901
Blue background indicates that the domain is not in the aligned region.

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